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Updated: Apr 17, 2026

Continuous Fluorescence-Based Endonuclease-Coupled DNA Methylation Assay to Screen for DNA Methyltransferase Inhibitors
Published on: August 5, 2022
DLEC1, a 3p tumor suppressor, represses NF-κB signaling and is methylated in prostate cancer
Lian Zhang1, Qian Zhang, LiLi Li
1Department of Urology, National Research Center for Genitourinary Oncology, Peking University First Hospital and Institute of Urology, Beijing, China.
Unlabelled:
Deleted in lung and esophageal cancer 1 (DLEC1), located at 3p22-p21.3, is involved in the carcinogenesis of multiple cancers, but its role in prostate cancer (PrCa) remains unclear. Here, we studied the epigenetic alteration of DLEC1 and its functions in prostate cancer. We found that DLEC1 was highly expressed in normal prostate tissues, normal prostatic epithelium cell line (RWPE-1), and benign prostatic hyperplasia cell line (BPH-1), but frequently downregulated by promoter methylation in PrCa cell lines. Pharmacologic demethylation could restore DLEC1 expression. DLEC1 was downregulated in prostate tumor tissues compared with their adjacent non-malignant tissues. DLEC1 was methylated in 76/110 primary tumors, but rarely in benign prostatic hyperplasia tissues. DLEC1 methylation was associated with higher PSA levels (p = 0.016), higher Gleason scores (p = 0.015), and more advanced tumor stages (p = 0.003). Furthermore, DLEC1 methylation was detected in 11/30 urine sediment samples from PrCa patients, but seldom in ones from BPH patients. Ectopic expression of DLEC1 inhibited the colony formation of PrCa cells, through inducing cell apoptosis. DLEC1 also suppressed PrCa cell migration. Moreover, DLEC1 inhibited NF-κB transcription activity in PrCa and HEK293 cells. Taken together, our data demonstrate that DLEC1 functions as a tumor suppressor but is frequently methylated in prostate cancer. DLEC1 methylation is associated with prostate cancer progression, which could be a non-invasive epigenetic biomarker for PrCa diagnosis.
Key Messages:
• Promoter methylation of DLEC1 is a potential prognostic biomarker for PrCa. • DLEC1, a functional tumor suppressor, is frequently methylated in PrCa. • DLEC1 suppresses prostate cancer growth and metastatic behavior. • DLEC1 mediates tumor-suppressive activities through NF-κB signaling.
Insights
Deleted in lung and esophageal cancer 1 (DLEC1) is frequently methylated in prostate cancer, acting as a tumor suppressor. This epigenetic alteration is linked to cancer progression and may serve as a diagnostic biomarker.
Area of Science:
- Oncology
- Epigenetics
- Molecular Biology
Background:
- Deleted in lung and esophageal cancer 1 (DLEC1) is implicated in various cancers, but its role in prostate cancer (PrCa) is not well-defined.
- Epigenetic modifications, particularly promoter methylation, are crucial in cancer development and progression.
- Understanding the function and regulation of DLEC1 in PrCa is essential for identifying new diagnostic and therapeutic targets.
Purpose of the Study:
- To investigate the epigenetic alteration of DLEC1 in prostate cancer.
- To elucidate the functional role of DLEC1 as a tumor suppressor in PrCa.
- To evaluate DLEC1 methylation as a potential biomarker for PrCa diagnosis and prognosis.
Main Methods:
- Analysis of DLEC1 expression and promoter methylation in PrCa cell lines and tissues.
- Pharmacologic demethylation to assess DLEC1 re-expression.
- Functional assays including colony formation, apoptosis, and migration assays in PrCa cells.
- Detection of DLEC1 methylation in urine sediment samples from PrCa patients.
- Investigation of DLEC1's effect on NF-κB signaling pathway.
Main Results:
- DLEC1 is highly expressed in normal prostate tissues but frequently downregulated by promoter methylation in PrCa.
- Pharmacologic demethylation restored DLEC1 expression, confirming methylation's role.
- DLEC1 methylation was significantly associated with higher PSA levels, Gleason scores, and advanced tumor stages.
- DLEC1 methylation was detected in urine samples of PrCa patients, distinguishing them from BPH patients.
- Ectopic DLEC1 expression inhibited PrCa cell growth, induced apoptosis, suppressed migration, and inhibited NF-κB activity.
Conclusions:
- DLEC1 functions as a tumor suppressor in prostate cancer.
- Frequent promoter methylation of DLEC1 in PrCa is linked to disease progression.
- DLEC1 methylation serves as a potential non-invasive epigenetic biomarker for PrCa diagnosis.
- DLEC1 suppresses PrCa growth and metastasis, partly through the NF-κB signaling pathway.
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