Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Upsampling01:22

Upsampling

731
Managing signal sampling rates is essential in digital signal processing to maintain signal integrity. A decimated signal, characterized by a reduced frequency range due to its lower sampling rate, can be upsampled by inserting zeros between each sample. This upsampling process expands the original spectrum and introduces repeated spectral replicas at intervals dictated by the new Nyquist frequency. To refine this zero-inserted sequence, it is passed through a lowpass filter with a cutoff...
731
Aliasing01:18

Aliasing

856
Accurate signal sampling and reconstruction are crucial in various signal-processing applications. A time-domain signal's spectrum can be revealed using its Fourier transform. When this signal is sampled at a specific frequency, it results in multiple scaled replicas of the original spectrum in the frequency domain. The spacing of these replicas is determined by the sampling frequency.
If the sampling frequency is below the Nyquist rate, these replicas overlap, preventing the original...
856
Sampling Theorem01:15

Sampling Theorem

1.6K
In signal processing, the analysis of continuous-time signals, denoted as x(t), often involves sampling techniques to convert these signals into discrete-time signals. This process is essential for digital representation and manipulation. A critical component in sampling is the train of impulses, characterized by the sampling interval and the sampling frequency. The relationship between these parameters and the original signal's properties dictates the success of the sampling process.
1.6K
Bandpass Sampling01:17

Bandpass Sampling

643
In signal processing, bandpass sampling is an effective technique for sampling signals that have most of their energy concentrated within a narrow frequency band. This type of signal is known as a bandpass signal. The key principle of bandpass sampling involves sampling the signal at a rate that is greater than twice the signal's bandwidth to prevent aliasing.
A bandpass signal has a spectrum with a lower frequency limit, denoted as ω1, and an upper frequency limit, denoted as ω2....
643
Downsampling01:20

Downsampling

822
When considering a sampled sequence with zero values between sampling instants, one can replace it by taking every N-th value of the sequence. At these integer multiples of N, the original and sampled sequences coincide. This process, known as decimation, involves extracting every N-th sample from a sequence, thereby creating a more efficient sequence.
The Fourier transform of the decimated sequence reveals a combination of scaled and shifted versions of the original spectrum. This...
822
Sampling Methods: Overview01:06

Sampling Methods: Overview

4.2K
A sample refers to a smaller subset representative of a larger population. In analytical chemistry, studying or analyzing an entire population is often impractical or impossible. Therefore, samples are used to draw inferences and generalize the whole population. The sampling method selects individuals or items from a population to create a sample. Standard sampling methods include random, judgemental, systematic, stratified, and cluster sampling. 
In analytical chemistry, the choice of...
4.2K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Fourth-order extension of multichromophoric Förster energy transfer.

The Journal of chemical physics·2026
Same author

Simulated pH-difference infrared spectra: Application to the PsbS monomer.

The Journal of chemical physics·2026
Same author

Fluorescence-detected two-dimensional electronic spectroscopy: A coarse-grained simulation approach.

The Journal of chemical physics·2026
Same author

Biomolecular dynamics using optical methods-Theory and experiment.

The Journal of chemical physics·2026
Same author

Modeling incoherent exciton transport between chlorosome tubes.

The Journal of chemical physics·2026
Same author

Directly Measuring the Connectivity between Isoenergetic Light-Harvesting Antennas in Plant Photosystem II at Physiological Temperature.

The journal of physical chemistry letters·2026

Related Experiment Video

Updated: Apr 17, 2026

Simulation, Fabrication and Characterization of THz Metamaterial Absorbers
13:44

Simulation, Fabrication and Characterization of THz Metamaterial Absorbers

Published on: December 27, 2012

16.1K

Suppressing sampling noise in linear and two-dimensional spectral simulations.

Johannes F Kruiger1, Cornelis P van der Vegte1, Thomas L C Jansen1

  • 1Zernike Institute for Advanced Materials, University of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands.

The Journal of Chemical Physics
|February 10, 2015
PubMed
Summary
This summary is machine-generated.

A novel adaptive apodization method effectively suppresses sampling noise in spectroscopy simulations. This technique improves accuracy and speeds up simulations for complex molecular systems like proteins.

More Related Videos

Author Spotlight: Unveiling the Potential of VSFG Microscopy in Studying Mesoscopically Heterogeneous Self-Assembled Structures
08:49

Author Spotlight: Unveiling the Potential of VSFG Microscopy in Studying Mesoscopically Heterogeneous Self-Assembled Structures

Published on: December 1, 2023

2.2K
ARL Spectral Fitting as an Application to Augment Spectral Data via Franck-Condon Lineshape Analysis and Color Analysis
07:11

ARL Spectral Fitting as an Application to Augment Spectral Data via Franck-Condon Lineshape Analysis and Color Analysis

Published on: August 19, 2021

3.1K

Related Experiment Videos

Last Updated: Apr 17, 2026

Simulation, Fabrication and Characterization of THz Metamaterial Absorbers
13:44

Simulation, Fabrication and Characterization of THz Metamaterial Absorbers

Published on: December 27, 2012

16.1K
Author Spotlight: Unveiling the Potential of VSFG Microscopy in Studying Mesoscopically Heterogeneous Self-Assembled Structures
08:49

Author Spotlight: Unveiling the Potential of VSFG Microscopy in Studying Mesoscopically Heterogeneous Self-Assembled Structures

Published on: December 1, 2023

2.2K
ARL Spectral Fitting as an Application to Augment Spectral Data via Franck-Condon Lineshape Analysis and Color Analysis
07:11

ARL Spectral Fitting as an Application to Augment Spectral Data via Franck-Condon Lineshape Analysis and Color Analysis

Published on: August 19, 2021

3.1K

Area of Science:

  • Computational Chemistry
  • Spectroscopy
  • Biophysics

Background:

  • Sampling noise is a significant challenge in time-domain simulations of spectroscopic techniques.
  • Existing apodization methods can introduce spectral aberrations or require extensive computational resources.

Purpose of the Study:

  • To develop and validate a new adaptive apodization scheme for noise reduction in spectroscopy simulations.
  • To assess the impact of this scheme on spectral accuracy and simulation efficiency.

Main Methods:

  • An adaptive apodization method based on physical principles was devised.
  • The method was tested on an artificial dimer system for slope analysis.
  • Simulated two-dimensional infrared spectra of lysozyme were analyzed, focusing on the cross-polarization component.

Main Results:

  • The adaptive apodization scheme effectively suppresses sampling noise.
  • It introduces minimal spectral aberrations, allowing for reduced disorder realizations.
  • The method demonstrated improved accuracy compared to lifetime and Gaussian apodization schemes, especially for the cross-polarization component.

Conclusions:

  • The developed adaptive apodization scheme offers a more accurate and efficient approach for time-domain spectroscopy simulations.
  • This method has broad applicability in studying spectral dynamics and molecular systems.