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Updated: Apr 17, 2026

Split Hybridization Probe Utilizing a DNA Fluorescent Light-up Aptamer as a Signal Reporter for Sequence-Specific Nucleic Acid Analysis
Published on: July 8, 2025
A H+/Ag+ dual-target responsive label-free light-up probe based on a DNA triplex
Lijun Xu1, Yahui Guo, Jine Wang
1Key Laboratory of Nano-Bio Interface, Division of Nanobiomedicine, Collaborative Innovation Center of Suzhou Nano Science and Technology, Suzhou Institute of Nano-Tech and Nano-Bionics, Chinese Academy of Sciences, Suzhou, 215123 (P.R. China); Department of Chemistry, Zhengzhou University, Zhengzhou, 450001 (P.R. China).
This study introduces a novel sensor for detecting protons and silver ions using DNA and berberine. The sensor exhibits a "OR" logic gate, enabling rapid and reversible fluorescent detection.
Area of Science:
- Biochemistry
- Analytical Chemistry
- Molecular Biology
Background:
- Accurate detection of protons (H+) and silver ions (Ag+) is crucial in various scientific fields.
- Existing detection methods may lack selectivity, sensitivity, or require complex procedures.
- Development of simple, cost-effective, and reliable sensors is an ongoing need.
Purpose of the Study:
- To develop a dual-target responsive sensor for label-free fluorescent detection of protons (H+) and silver ions (Ag+).
- To implement an
- OR
- logic gate for simultaneous or independent detection.
- To utilize berberine as a cost-effective and non-toxic fluorescent indicator.
Main Methods:
- Design of a DNA-based sensor capable of forming a triplex structure.
- Partial intercalation of berberine into the DNA triplex upon binding with H+ or Ag+.
- Utilizing the enhanced fluorescence of berberine for signal generation.
- Implementation of an
- OR
- logic gate for signal processing.
Main Results:
- The sensor demonstrated label-free, light-up fluorescent detection of both protons (H+) and silver ions (Ag+).
- The designed silver ion (Ag+) probe exhibited high selectivity and sensitivity.
- The
- OR
- logic gate showed a rapid and reversible response to the presence of H+ and/or Ag+.
- Berberine acted as an effective and non-toxic fluorescent indicator.
Conclusions:
- A novel dual-target responsive sensor based on DNA triplex and berberine was successfully developed.
- The sensor effectively performs label-free, light-up fluorescent detection with an
- OR
- logic gate.
- The system offers a promising platform for practical applications requiring selective and sensitive detection of protons and silver ions.
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