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Updated: Apr 17, 2026

Isolation of Mouse Primary Microglia by Magnetic-Activated Cell Sorting in Animal Models of Demyelination
Published on: April 5, 2022
A novel size-based sorting mechanism of pinocytic luminal cargoes in microglia
Cong Chen1, Hui-Quan Li1, Yi-Jun Liu1
1Department of Neurobiology, Key Laboratory of Medical Neurobiology of The Ministry of Health of China, Key Laboratory of Neurobiology of Zhejiang Province, and.
Abstract:
Microglia are the resident immune cells in the CNS and play diverse roles in the maintenance of CNS homeostasis. Recent studies have shown that microglia continually survey the CNS microenvironment and scavenge cell debris and aberrant proteins by phagocytosis and pinocytosis, and that reactive microglia are capable to present antigens to T cells and initiate immune responses. However, how microglia process the endocytosed contents and evoke an immune response remain unclear. Here we report that a size-dependent selective transport of small soluble contents from the pinosomal lumen into lysosomes is critical for the antigen processing in microglia. Using fluorescent probes and water-soluble magnetic nanobeads of defined sizes, we showed in cultured rodent microglia, and in a cell-free reconstructed system that pinocytosed proteins become degraded immediately following pinocytosis and the resulting peptides are selectively delivered to major histocompatibility complex class II (MHC-II) containing lysosomes, whereas undegraded proteins are retained in the pinosomal lumen. This early size-based sorting of pinosomal contents relied on the formation of transient tunnel between pinosomes and lysosomes in a Rab7- and dynamin II-dependent manner, which allowed the small contents to pass through but restricted large ones. Inhibition of the size-based sorting markedly reduced proliferation and cytokine release of cocultured CD4(+) T cells, indicating that the size-based sorting is required for efficient antigen presentation by microglial cells. Together, these findings reveal a novel early sorting mechanism for pinosomal luminal contents in microglial cells, which may explain how microglia efficiently process protein antigens and evoke an immune response.
Insights
Microglia selectively sort small proteins from pinosomes to lysosomes for antigen presentation. This size-dependent mechanism is crucial for microglial immune responses and T cell activation.
Area of Science:
- Neuroimmunology
- Cell Biology
- Protein Trafficking
Background:
- Microglia, the CNS immune cells, maintain homeostasis and initiate immune responses.
- Microglia phagocytose and pinocytose debris and proteins, but antigen processing mechanisms are unclear.
Purpose of the Study:
- To elucidate the mechanism of antigen processing and immune response initiation in microglia.
- To investigate how endocytosed contents are processed for T cell presentation.
Main Methods:
- Utilized fluorescent probes and magnetic nanobeads of defined sizes in cultured microglia.
- Employed a cell-free system to study protein degradation and transport.
- Investigated Rab7 and dynamin II roles in pinosome-lysosome trafficking.
Main Results:
- Discovered size-dependent selective transport of small soluble contents from pinosomes to lysosomes.
- Demonstrated immediate protein degradation and peptide delivery to MHC-II lysosomes.
- Showed that inhibiting this sorting reduces T cell proliferation and cytokine release.
Conclusions:
- A novel early sorting mechanism in microglia relies on transient pinosome-lysosome tunnels.
- This size-based sorting is essential for efficient microglial antigen presentation to T cells.
- Findings explain how microglia process antigens and evoke immune responses.
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