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An In Vitro Protocol for Evaluating MicroRNA Levels, Functions, and Associated Target Genes in Tumor Cells
Published on: May 21, 2019
Silencing LRH-1 in colon cancer cell lines impairs proliferation and alters gene expression programs
James R Bayrer1, Sridevi Mukkamala2, Elena P Sablin2
1Division of Pediatric Gastroenterology, Hepatology, and Nutrition, Department of Pediatrics, University of California, San Francisco, CA 94143-0136;
Abstract:
Colorectal cancers (CRCs) account for nearly 10% of all cancer deaths in industrialized countries. Recent evidence points to a central role for the nuclear receptor liver receptor homolog-1 (LRH-1) in intestinal tumorigenesis. Interaction of LRH-1 with the Wnt/β-catenin pathway, highly active in a critical subpopulation of CRC cells, underscores the importance of elucidating LRH-1's role in this disease. Reduction of LRH-1 diminishes tumor burden in murine models of CRC; however, it is not known whether LRH-1 is required for tumorigenesis, for proliferation, or for both. In this work, we address this question through shRNA-mediated silencing of LRH-1 in established CRC cell lines. LRH-1 mRNA knockdown results in significantly impaired proliferation in a cell line highly expressing the receptor and more modest impairment in a cell line with moderate LRH-1 expression. Cell-cycle analysis shows prolongation of G0/G1 with LRH-1 silencing, consistent with LRH-1 cell-cycle influences in other tissues. Cluster analysis of microarray gene expression demonstrates significant genome wide alterations with major effects in cell-cycle regulation, signal transduction, bile acid and cholesterol metabolism, and control of apoptosis. This study demonstrates a critical proproliferative role for LRH-1 in established colon cancer cell lines. LRH-1 exerts its effects via multiple signaling networks. Our results suggest that selected CRC patients could benefit from LRH-1 inhibitors.
Insights
Liver receptor homolog-1 (LRH-1) drives proliferation in colon cancer cells. Inhibiting LRH-1 may benefit patients with colorectal cancer (CRC) by impairing tumor growth.
Area of Science:
- Oncology
- Molecular Biology
- Cell Biology
Background:
- Colorectal cancer (CRC) is a leading cause of cancer death globally.
- The nuclear receptor liver receptor homolog-1 (LRH-1) is implicated in intestinal tumorigenesis.
- LRH-1 interacts with the Wnt/β-catenin pathway, crucial in a subset of CRC cells.
Purpose of the Study:
- To determine if LRH-1 is essential for colorectal cancer (CRC) proliferation or tumorigenesis.
- To investigate the functional role of LRH-1 in established CRC cell lines.
Main Methods:
- Short hairpin RNA (shRNA)-mediated knockdown of LRH-1 in CRC cell lines.
- Cell-cycle analysis to assess proliferation.
- Microarray gene expression profiling and cluster analysis.
Main Results:
- LRH-1 knockdown significantly impaired proliferation in CRC cells with high LRH-1 expression.
- LRH-1 silencing led to G0/G1 cell-cycle arrest.
- Gene expression analysis revealed widespread alterations in cell-cycle regulation, signal transduction, and metabolism.
Conclusions:
- LRH-1 plays a critical proproliferative role in established colon cancer cell lines.
- LRH-1 influences multiple signaling networks, including cell-cycle control and metabolism.
- LRH-1 inhibitors represent a potential therapeutic strategy for selected CRC patients.
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