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Discovery of potent, orally bioavailable, small-molecule inhibitors of WNT signaling from a cell-based pathway screen
Aurélie Mallinger1, Simon Crumpler, Mark Pichowicz
1Cancer Research UK Cancer Therapeutics Unit at The Institute of Cancer Research, London SW7 3RP, U.K.
Abstract:
WNT signaling is frequently deregulated in malignancy, particularly in colon cancer, and plays a key role in the generation and maintenance of cancer stem cells. We report the discovery and optimization of a 3,4,5-trisubstituted pyridine 9 using a high-throughput cell-based reporter assay of WNT pathway activity. We demonstrate a twisted conformation about the pyridine-piperidine bond of 9 by small-molecule X-ray crystallography. Medicinal chemistry optimization to maintain this twisted conformation, cognisant of physicochemical properties likely to maintain good cell permeability, led to 74 (CCT251545), a potent small-molecule inhibitor of WNT signaling with good oral pharmacokinetics. We demonstrate inhibition of WNT pathway activity in a solid human tumor xenograft model with evidence for tumor growth inhibition following oral dosing. This work provides a successful example of hypothesis-driven medicinal chemistry optimization from a singleton hit against a cell-based pathway assay without knowledge of the biochemical target.
Insights
Researchers discovered a novel WNT signaling inhibitor, CCT251545, by optimizing a pyridine compound. This potent small molecule effectively inhibits WNT pathway activity and reduces tumor growth in preclinical models.
Area of Science:
- Medicinal Chemistry
- Oncology
- Molecular Biology
Background:
- WNT signaling is crucial in cancer development, especially colon cancer, and drives cancer stem cell maintenance.
- Dysregulation of WNT signaling is a common hallmark of various malignancies.
Purpose of the Study:
- To discover and optimize novel small-molecule inhibitors of WNT signaling.
- To develop potent WNT pathway inhibitors with favorable pharmacokinetic properties for potential cancer therapy.
Main Methods:
- High-throughput cell-based reporter assay to screen for WNT pathway modulators.
- Structure-activity relationship studies and medicinal chemistry optimization of a pyridine scaffold.
- X-ray crystallography to determine the compound's conformation.
- In vivo studies using human tumor xenograft models to assess efficacy and pharmacokinetics.
Main Results:
- Discovery of a 3,4,5-trisubstituted pyridine derivative (compound 9) with WNT pathway inhibitory activity.
- Optimization led to CCT251545, a potent WNT signaling inhibitor with a specific twisted conformation and good oral bioavailability.
- Demonstrated inhibition of WNT pathway activity and significant tumor growth inhibition in a human tumor xenograft model after oral administration.
Conclusions:
- Successful hypothesis-driven optimization of a WNT signaling inhibitor from a cell-based assay hit.
- CCT251545 represents a promising WNT signaling inhibitor for preclinical development in cancers driven by WNT pathway dysregulation.
- This study highlights the potential of targeting WNT signaling in cancer therapy.
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