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Published on: May 31, 2018
Method for exploratory cluster analysis and visualisation of single-trial ERP ensembles.
N J Williams1, S J Nasuto1, J D Saddy1
1Centre for Integrative Neuroscience & Neurodynamics, University of Reading, Whiteknights Campus, Reading RG6 6AH, United Kingdom.
This study introduces a novel pipeline for analyzing event-related potential (ERP) data, revealing significant cluster structures. Applying this cluster analysis before ensemble averaging is recommended for more accurate ERP research.
Area of Science:
- Neuroscience
- Computational Neuroscience
- Data Analysis
Background:
- Ensemble averaging of event-related potential (ERP) data assumes identical trials, a premise often invalid.
- A need exists for preliminary data analysis to identify cluster structures in ERP datasets.
Purpose of the Study:
- To develop and validate a comprehensive pipeline for cluster analysis of ERP data.
- To address the limitations of ensemble averaging by identifying underlying data structures.
Main Methods:
- A pipeline utilizing Empirical Mode Decomposition (EMD) for denoising single-trial ERPs.
- A bootstrap-based Stability Index (SI) to determine the optimal number of clusters.
- A Genetic Algorithm (GA) for initial centroid selection, followed by k-means clustering.
- Principal Component Analysis (PCA) for visualizing clustering results.
Main Results:
- The pipeline was validated on simulated data and applied to real experimental ERP data.
- Evidence of 6 distinct clusters was found in a language processing study condition.
- Subject influenced cluster membership, as indicated by a two-way chi-square test.
Conclusions:
- The proposed analysis method operates on denoised single-trials with principled cluster number determination.
- Results are presented via an intuitive visualization scheme.
- Cluster analysis is suggested as a preliminary step prior to ensemble averaging in ERP studies.
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