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Rmax: A systematic approach to evaluate instrument sort performance using center stream catch.

Andrew Riddell1, Rui Gardner2, Alexis Perez-Gonzalez3

  • 1Flow Cytometry Core Facility, EMBL-Heidelberg, Germany; Flow Cytometry Facility, Wellcome Trust-Medical Research Council, Cambridge Stem Cell Institute, United Kingdom.

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|March 10, 2015
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Summary
This summary is machine-generated.

A new metric, Rmax, simplifies the measurement of instrument sort Recovery. This method avoids re-sampling and absolute counting, offering a practical quality control for cell sorting experiments, especially for rare populations.

Keywords:
Drop-charge delayFlow cytometryInstrument performancePurityQuality controlRecoveryRmaxSortYield

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Area of Science:

  • Cellular Biology
  • Biotechnology
  • Analytical Chemistry

Background:

  • Sorting performance is crucial for cell-based research and diagnostics.
  • Traditional metrics like Purity, Yield, and Recovery have limitations, particularly Yield and Recovery, due to measurement complexities.
  • Purity alone is insufficient for comprehensive performance evaluation, necessitating accurate Yield and Recovery metrics.

Purpose of the Study:

  • To introduce a novel, simplified metric (Rmax) for evaluating instrument sort Recovery.
  • To overcome the challenges associated with traditional Yield and Recovery measurements, such as re-sampling and absolute counting.
  • To provide a practical tool for daily quality control and performance assessment of cell sorters.

Main Methods:

  • Developed a new metric, Rmax, defined as the ratio of sorted particles to original particles.
  • Rmax calculation relies on measuring population ratios in pre-sort samples and waste/center streams.
  • This method avoids re-sampling the sorted fraction and absolute particle counting.

Main Results:

  • Rmax offers a feasible way to measure instrument sort Recovery without perturbing the sorted fraction.
  • The metric successfully bypasses the need for absolute counting, which is often error-prone and impractical for rare or precious samples.
  • Rmax can be calculated during the sorting process, enabling real-time performance monitoring.

Conclusions:

  • Rmax provides a robust and accessible method for assessing cell sorter performance, particularly Recovery.
  • This metric is valuable for troubleshooting instrument parameters like drop-charge delay and identifying failures.
  • Rmax is especially beneficial for experiments involving rare cell populations and for routine quality control.