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Updated: Apr 16, 2026

Chemical Triphosphorylation of Oligonucleotides
Published on: June 2, 2022
Homolytic C-O cleavage in phosphates and sulfonates
Lanlan Ding1, Wenrui Zheng1, Yingxing Wang1
1College of Chemistry and Chemical Engineering, Shanghai University of Engineering Science, Shanghai 201620, China.
This study accurately calculated carbon-oxygen bond dissociation enthalpies (BDEs) using advanced computational methods. The wB97 method proved most reliable, revealing distinct substituent effects on alkenyl and aryl phosphates/sulfonates.
Area of Science:
- Computational Chemistry
- Quantum Chemistry
- Organic Chemistry
Background:
- Accurate calculation of bond dissociation enthalpies (BDEs) is crucial for understanding chemical reactivity.
- Various high-level ab initio and density functional theory (DFT) methods exist, but their reliability for C-O BDEs requires careful evaluation.
Purpose of the Study:
- To rigorously assess and identify the most accurate computational method for calculating C-O homolytic bond dissociation enthalpies.
- To investigate the substituent effects on the C-O BDEs of alkenyl and aryl phosphates/sulfonates using a validated high-accuracy method.
Main Methods:
- High-level ab initio calculations (G4, G3B3, G3, CBS-QB3).
- Density functional theory (DFT) methods, including wB97.
- Natural Bond Orbital (NBO) analysis.
Main Results:
- The wB97 method demonstrated the highest reliability for C-O BDEs with a root-mean-square deviation (RMSD) of 7.6 kJ/mol.
- Distinct substituent effects were observed for α- and β-substituted alkenyl phosphates/sulfonates.
- Excellent linear correlations were found between C-O BDEs and the σp(+) substituent constant for β-substituted alkenyl systems.
Conclusions:
- The wB97 method is recommended for accurate C-O BDE predictions.
- Substituent effects significantly influence C-O BDEs in phosphates and sulfonates, with variations between alkenyl and aryl systems.
- NBO analysis provides insights into the electronic origins of these substituent effects on C-O bond strength.
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