Related Experiment Video
Updated: Apr 16, 2026

A RANKL-based Osteoclast Culture Assay of Mouse Bone Marrow to Investigate the Role of mTORC1 in Osteoclast Formation
Published on: March 15, 2018
HDAC9 Inhibits Osteoclastogenesis via Mutual Suppression of PPARγ/RANKL Signaling
Zixue Jin1, Wei Wei, HoangDinh Huynh
1Department of Pharmacology, University of Texas Southwestern Medical Center, Dallas, Texas 75390.
Insights
Histone deacetylase 9 (HDAC9) suppresses bone breakdown by inhibiting osteoclast differentiation. Loss of HDAC9 leads to increased bone resorption and lower bone mass, highlighting its role in skeletal homeostasis.
Area of Science:
- Molecular Biology
- Immunology
- Bone Biology
Background:
- Class II histone deacetylase 9 (HDAC9) is implicated in metabolic and immune functions.
- Its role in bone turnover and skeletal homeostasis remains largely unexplored.
Purpose of the Study:
- To investigate the function of HDAC9 in regulating osteoclast differentiation and bone resorption.
- To elucidate the molecular mechanisms by which HDAC9 controls bone turnover.
Main Methods:
- HDAC9 knockout mice and wild-type littermates were used.
- Ex vivo osteoclast differentiation assays and bone marrow transplantation were performed.
- Molecular mechanisms involving peroxisome proliferator-activated receptor gamma (PPARγ) and receptor activator of nuclear factor kappa-B ligand (RANKL) signaling were analyzed.
Main Results:
- HDAC9 expression decreases during osteoclastogenesis.
- HDAC9 deficiency accelerates osteoclast differentiation and bone resorption, leading to reduced bone mass.
- HDAC9 acts intrinsically within the hematopoietic lineage to regulate osteoclast activity.
- HDAC9 forms a negative regulatory loop with PPARγ and RANKL signaling.
Conclusions:
- HDAC9 is a critical suppressor of osteoclast differentiation and bone resorption.
- HDAC9 plays a significant role in maintaining skeletal homeostasis.
- HDAC9 represents a novel therapeutic target for bone-related disorders.
Abstract:
Recent studies suggest that the class II histone deacetylase (HDAC)9 plays important roles in physiology such as metabolism and immunity. Here, we report that HDAC9 also controls bone turnover by suppressing osteoclast differentiation and bone resorption. HDAC9 expression is down-regulated during osteoclastogenesis. Ex vivo osteoclast differentiation is accelerated by HDAC9 deletion but diminished by HDAC9 overexpression. HDAC9 knockout mice exhibit elevated bone resorption and lower bone mass. Bone marrow transplantation reveal that the osteoclastogenic defects are intrinsic to the hematopoietic lineage, because the excessive bone resorption phenotype can be conferred in wild-type (WT) mice receiving HDAC9-null bone marrow, and rescued in HDAC9-null mice receiving WT bone marrow. Mechanistically, HDAC9 forms a negative regulatory loop with peroxisome proliferator-activated receptor gamma (PPARg) and receptor activator of nuclear factor kappa-B ligand (RANKL) signaling. On one hand, PPARγ and nuclear factor κB suppress HDAC9 expression, on the other hand, HDAC9 inhibits PPARγ activity in synergy with silencing mediator of retinoic acid and thyroid hormone receptors (SMRT)/NCoR corepressors. These findings identify HDAC9 as a novel, important and physiologically relevant modulator of bone remodeling and skeletal homeostasis.
Related Concept Videos
Osteoclasts in Bone Remodeling
Hormones and Bone Tissue
Hormones That Influence Osteoblasts and/or Maintain the Matrix
Several hormones are necessary for controlling bone growth and maintaining the bone matrix. The pituitary gland secretes growth hormone (GH), which, as its name implies, controls bone growth. This happens in several ways: first, it triggers chondrocyte...
Hedgehog Signaling Pathway
Co-activators and Co-repressors
TGF - β Signaling Pathway
The JAK-STAT Signaling Pathway

