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Updated: Apr 15, 2026

Use of Ultra-high Field MRI in Small Rodent Models of Polycystic Kidney Disease for In Vivo Phenotyping and Drug Monitoring
Published on: June 23, 2015
4D MRI of polycystic kidneys from rapamycin-treated Glis3-deficient mice
Luke Xie1, Yi Qi, Ergys Subashi
1Center for In Vivo Microscopy, Department of Radiology, Duke University Medical Center, Durham, NC, USA; Department of Biomedical Engineering, Duke University, Durham, NC, USA.
Abstract:
Polycystic kidney disease (PKD) is a life-threatening disease that leads to a grotesque enlargement of the kidney and significant loss of function. Several imaging studies with MRI have demonstrated that cyst size in polycystic kidneys can determine disease severity and progression. In the present study, we found that, although kidney volume and cyst volume decreased with drug treatment, renal function did not improve with treatment. Here, we applied dynamic contrast-enhanced MRI to study PKD in a Glis3 (GLI-similar 3)-deficient mouse model. Cysts from this model have a wide range of sizes and develop at an early age. To capture this crucial stage and assess cysts in detail, we imaged during early development (3-17 weeks) and applied high spatiotemporal resolution MRI (125 × 125 × 125 cubic microns every 7.7 s). A drug treatment with rapamycin (also known as sirolimus) was applied to determine whether disease progression could be halted. The effect and synergy (interaction) of aging and treatment were evaluated using an analysis of variance (ANOVA). Structural measurements, including kidney volume, cyst volume and cyst-to-kidney volume ratio, changed significantly with age. Drug treatment significantly decreased these metrics. Functional measurements of time-to-peak (TTP) mean and TTP variance were determined. TTP mean did not change with age, whereas TTP variance increased with age. Treatment with rapamycin generally did not affect these functional metrics. Synergistic effects of treatment and age were not found for any measurements. Together, the size and volume ratio of cysts decreased with drug treatment, whereas renal function remained the same. The quantification of renal structure and function with MRI can comprehensively assess the pathophysiology of PKD and response to treatment.
Insights
Polycystic kidney disease (PKD) treatment with rapamycin reduced cyst size but did not improve renal function in mice. Dynamic contrast-enhanced MRI quantified structural and functional changes, showing treatment benefits for cyst burden but not kidney function.
Area of Science:
- Nephrology
- Medical Imaging
- Pharmacology
Background:
- Polycystic kidney disease (PKD) causes kidney enlargement and dysfunction, with cyst size correlating to severity.
- Dynamic contrast-enhanced MRI (DCE-MRI) is a valuable tool for assessing PKD structural changes.
- Rapamycin (sirolimus) is investigated for its potential to halt PKD progression.
Purpose of the Study:
- To evaluate the efficacy of rapamycin in a Glis3-deficient mouse model of PKD.
- To assess the impact of aging and rapamycin treatment on renal structure and function using high-resolution DCE-MRI.
- To investigate potential synergistic effects between aging and rapamycin treatment on PKD.
Main Methods:
- Utilized a Glis3-deficient mouse model exhibiting early-onset, variable-sized cysts.
- Applied high spatiotemporal resolution DCE-MRI (125µm³ resolution, 7.7s intervals) from 3-17 weeks of age.
- Analyzed structural (kidney/cyst volume) and functional (Time-to-Peak variance) metrics using ANOVA to assess aging and treatment effects.
Main Results:
- Kidney and cyst volumes, as well as cyst-to-kidney volume ratio, significantly decreased with rapamycin treatment.
- Renal function, measured by Time-to-Peak mean and variance, showed no significant improvement with treatment.
- No synergistic effects of aging and rapamycin treatment were observed on any measured parameters.
Conclusions:
- Rapamycin treatment effectively reduced cyst burden in this PKD mouse model.
- Despite structural improvements, rapamycin did not enhance renal function in the studied period.
- High-resolution DCE-MRI provides comprehensive assessment of PKD pathophysiology and treatment response.

