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Published on: July 22, 2011
[A method for determination of Neisseria meningitidis serogroup A, B, C and W by real-time PCR]
Aim:
Development and testing of a real-time PCR method for detection of Neisseria meningitiis serogroup A, B, C and W DNA.
Materials And Methods:
Reference strains and 187 samples of cerebrospinal fluid (CSF) from meningocci meningitis patients were used in the study. Multiplex PCR was carried out in an instrument with 5 channels of fluorescent detection:
Results:
Analysis of specific serogroup loci of the genome and design of oligonucleotides for the detection of DNA of all the capsule meningococci and 4 serogroups in particular was carried out. PCR conditions were optimized; specificity was shown and analytical sensitivity was evaluated using reference strains. DNA of the following serogroups was detected during study of clinical CSF samples: A--in 103 samples (55%), B--in 45 (24%), C--in 30 (16%), W--in 5 (3%). Only DNA of meningococci capstle gene ctrA was found in 4 samples; presumably, they contained DNA of other serogroups. Multilocus sequence-typing and detection of antigenic determinants of PorA and FetA genes for 27 DNA samples of group A menincococci as well as DNA of 5 group W meningococci and 4 ungroupable was carried out.
Conclusion:
The method proposed allows to carry out serogrouping of no less than 95% of strains or DNA samples isolated from CSF of meningococci infection patients. Combined with other recommended non-cultural methods of genotyping, it may be useful for complex characteristics of pathogenic meningococci.
Insights
A new real-time PCR method accurately identifies Neisseria meningitidis DNA from cerebrospinal fluid (CSF) samples. This rapid diagnostic tool effectively serogroups common meningococcal strains, aiding in meningitis diagnosis.
Area of Science:
- Molecular Biology
- Microbiology
- Infectious Diseases
Background:
- Neisseria meningitidis causes bacterial meningitis, a severe infection.
- Accurate and rapid serogroup identification is crucial for effective treatment and public health response.
- Existing diagnostic methods may have limitations in speed and specificity.
Purpose of the Study:
- To develop and validate a real-time PCR assay for detecting Neisseria meningitidis DNA.
- To enable simultaneous identification of serogroups A, B, C, and W.
- To assess the method's performance on clinical cerebrospinal fluid (CSF) samples.
Main Methods:
- Development of multiplex real-time PCR assays targeting specific Neisseria meningitidis serogroup loci.
- Optimization of PCR conditions for specificity and analytical sensitivity.
- Testing on reference strains and 187 clinical CSF samples from patients with meningococcal meningitis.
Main Results:
- The real-time PCR method successfully detected Neisseria meningitidis DNA in clinical samples.
- Serogroup distribution in CSF samples: A (55%), B (24%), C (16%), W (3%).
- The assay demonstrated high specificity and sensitivity, with potential for identifying other serogroups.
Conclusions:
- The developed real-time PCR method can serogroup at least 95% of Neisseria meningitidis strains or DNA from CSF.
- This method, combined with genotyping techniques, is valuable for comprehensive characterization of pathogenic Neisseria meningitidis.
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