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Related Concept Videos

Proteomics01:33

Proteomics

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A proteome is the entire set of proteins that a cell type produces. We can study proteomes using the knowledge of genomes because genes code for mRNAs, and the mRNAs encode proteins. Although mRNA analysis is a step in the right direction, not all mRNAs are translated into proteins.
Proteomics is the study of proteomes' function. It involves the large-scale systematic study of the proteome to denote the protein complement expressed by a genome. Scientist Mark Wilkins coined the term...
10.2K

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Updated: Apr 15, 2026

Deep Proteome Profiling by Isobaric Labeling, Extensive Liquid Chromatography, Mass Spectrometry, and Software-assisted Quantification
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Indian proteomics efforts and human proteome project.

Ravi Sirdeshmukh1

  • 1Institute of Bioinformatics, Bangalore 560066, India; Mazumdar Shaw Center for Translational Research, Bangalore 560099, India.

Journal of Proteomics
|March 31, 2015
PubMed
Summary

Indian researchers are significantly contributing to global human proteome mapping efforts, including the Chromosome-centric Human Proteome Project (C-HPP). These projects aim to comprehensively catalogue and understand human proteins and their roles in health and disease.

Keywords:
C-HPPHuman chromosomesHuman proteomeMass spectrometryProteomics

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Area of Science:

  • Proteomics
  • Human Proteome Project
  • Genomics

Background:

  • The human proteome, comprising all proteins encoded by the human genome, is crucial for understanding biological functions and diseases.
  • Previous efforts have generated draft maps and tissue-specific expression data of the human proteome.
  • The Human Proteome Organization initiated the Chromosome-centric and Biology/Disease-centric Human Proteome Projects (C-HPP and B/D-HPP) for in-depth protein analysis.

Purpose of the Study:

  • To highlight the complexity and challenges in deciphering the human proteome.
  • To showcase the significant contributions of Indian researchers to international human proteome initiatives.
  • To provide an overview of the ongoing C-HPP and its objectives.

Main Methods:

  • Large-scale mass spectrometric analysis for protein identification.
  • Antibody-based studies for protein expression and distribution across tissues and cells.
  • Collaborative research within international consortia, including Asian teams focusing on specific chromosomes like Chromosome 12.

Main Results:

  • Publication of draft maps of the human proteome, including identification of missing proteins.
  • Establishment of a Tissue-based Human Proteome Map detailing protein expression patterns.
  • Initial publications from an Asian consortium focusing on Chromosome 12, with substantial Indian involvement.
  • Significant Indian contributions to both draft proteome maps and ongoing C-HPP initiatives.

Conclusions:

  • Deciphering the human proteome is a complex and challenging endeavor requiring global collaboration.
  • Indian researchers play a vital role in advancing human proteome research, particularly within the C-HPP framework.
  • Continued participation and expansion of research efforts are essential for a comprehensive understanding of the human proteome in health and disease.