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Updated: Apr 15, 2026

Quantitative PCR-based Assay to Measure Sonic Hedgehog Signaling in Cellular Model of Ciliogenesis
Published on: January 31, 2025
Ptch1 and Gli regulate Shh signalling dynamics via multiple mechanisms
Michael Cohen1, Anna Kicheva1, Ana Ribeiro1
1MRC-National Institute for Medical Research, The Ridgeway, Mill Hill, London NW7 1AA, UK.
Sonic Hedgehog (Shh) signaling in the developing neural tube shows adaptive dynamics. Gli protein activity initially rises then falls due to multiple regulatory mechanisms, ensuring proper gene expression patterns.
Area of Science:
- Developmental Biology
- Molecular Biology
- Genetics
Background:
- Sonic Hedgehog (Shh) is a crucial morphogen for vertebrate neural tube development.
- Shh signaling establishes gene expression patterns essential for patterning the neural tube.
Purpose of the Study:
- To quantify the Shh gradient in the developing mouse neural tube.
- To investigate the adaptive dynamics of Gli protein activity in response to Shh signaling.
- To elucidate the molecular mechanisms underlying Shh pathway adaptation.
Main Methods:
- Quantitative analysis of Shh gradient and Gli protein activity over time.
- Computational modeling of Shh pathway dynamics.
- Experimental manipulation of Shh signaling downstream of Ptch1.
- Cell-type specific analysis in mouse neural tube and NIH3T3 fibroblasts.
Main Results:
- Shh gradient amplitude increases over time, while Gli protein activity exhibits adaptation (initial increase followed by decrease).
- Three mechanisms contribute to adaptation: Ptch1 upregulation, Gli downregulation, and differential Gli isoform stability.
- Gli2 downregulation and adaptation independent of Ptch1 further support these mechanisms.
- Shh-induced Gli2 transcription in fibroblasts prevents adaptation, highlighting cell-type specific differences.
Conclusions:
- Shh signaling exhibits complex intracellular dynamics involving multiple adaptive mechanisms.
- These adaptive mechanisms are crucial for precise neural tube patterning.
- Signaling dynamics differ across cell types, indicating context-dependent regulation of the Shh pathway.
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