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Published on: January 22, 2019
Structure of N-myristoyltransferase from Aspergillus fumigatus
Takashi Shimada1, Makoto Suzuki1, Shin-ichi Katakura1
1Drug Discovery and Biomedical Technology Unit, Daiichi Sankyo RD Novare Co. Ltd, 1-16-13 Kita-kasai, Edogawa-ku, Tokyo 134-8630, Japan.
Abstract:
N-Myristoyltransferase (NMT) is an enzyme which translocates the 14-carbon saturated fatty acid myristate from myristoyl-CoA to the N-terminal glycine of substrate peptides. This myristoylation process is involved in protein modification in various eukaryotes, including animals and fungi. Furthermore, this enzyme has been shown to be essential to the growth of various species, such as Saccharomyces cerevisiae, which indicates that NMT is an attractive target for the development of a novel antifungal drug. In this study, the crystal structure of a ternary complex of NMT from Aspergillus fumigatus with S-(2-oxo)pentadecyl-CoA, a myristoyl-CoA analogue cofactor, and a synthetic inhibitor is reported at a resolution of 2.1 Å. The results advance the understanding of the specificity of NMT inhibitors and provide valuable information for structure-based drug design.
Insights
N-Myristoyltransferase (NMT) is crucial for protein modification and fungal growth. This study reveals the crystal structure of an NMT-inhibitor complex, aiding antifungal drug design.
Area of Science:
- Biochemistry
- Structural Biology
- Drug Discovery
Background:
- N-Myristoyltransferase (NMT) facilitates protein myristoylation, a vital post-translational modification in eukaryotes.
- NMT is essential for the growth of fungi like Saccharomyces cerevisiae, making it a promising antifungal drug target.
- Understanding NMT structure is key to developing specific inhibitors.
Purpose of the Study:
- To elucidate the structural basis of N-myristoyltransferase inhibition.
- To provide insights for the rational design of novel antifungal agents targeting NMT.
Main Methods:
- X-ray crystallography was employed to determine the structure of a ternary complex.
- The complex included NMT from Aspergillus fumigatus, a myristoyl-CoA analogue (S-(2-oxo)pentadecyl-CoA), and a synthetic inhibitor.
- High-resolution data was collected to 2.1 Å.
Main Results:
- The crystal structure of the Aspergillus fumigatus NMT ternary complex was determined.
- Detailed structural information on the interaction between NMT, cofactor analogue, and inhibitor was obtained.
- The findings offer insights into the specificity of NMT inhibitors.
Conclusions:
- The determined structure advances the understanding of NMT inhibitor specificity.
- This structural information is valuable for structure-based drug design against fungal pathogens.
- The study provides a foundation for developing new antifungal therapies targeting NMT.
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