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Emerging OP354-Like P[8] Rotaviruses Have Rapidly Dispersed from Asia to Other Continents
Mark Zeller1, Elisabeth Heylen2, Susan Damanka3
1KU Leuven-University of Leuven, Department of Microbiology and Immunology, Laboratory for Clinical and Epidemiological Virology, Rega Institute for Medical Research, Leuven, Belgium mark.zeller@uz.kuleuven.ac.be jelle.matthijnssens@uz.kuleuven.ac.be.
Abstract:
The majority of human group A rotaviruses possess the P[8] VP4 genotype. Recently, a genetically distinct subtype of the P[8] genotype, also known as OP354-like P[8] or lineage P[8]-4, emerged in several countries. However, it is unclear for how long the OP354-like P[8] gene has been circulating in humans and how it has spread. In a global collaborative effort 98 (near-)complete OP354-like P[8] VP4 sequences were obtained and used for phylogeographic analysis to determine the viral migration patterns. During the sampling period, 1988-2012, we found that South and East Asia acted as a source from which strains with the OP354-like P[8] gene were seeded to Africa, Europe, and North America. The time to the most recent common ancestor (TMRCA) of all OP354-like P[8] genes was estimated at 1987. However, most OP354-like P[8] strains were found in three main clusters with TMRCAs estimated between 1996 and 2001. The VP7 gene segment of OP354-like P[8] strains showed evidence of frequent reassortment, even in localized epidemics, suggesting that OP354-like P[8] genes behave in a similar manner on the evolutionary level as other P[8] subtypes. The results of this study suggest that OP354-like P[8] strains have been able to disperse globally in a relatively short time period. This, in combination with a relatively large genetic distance to other P[8] subtypes, might result in a lower vaccine effectiveness, underscoring the need for a continued surveillance of OP354-like P[8] strains, especially in countries where rotavirus vaccination programs are in place.
Insights
A novel rotavirus strain, OP354-like P[8], spread globally from Asia between 1988-2012. Its genetic distance may reduce vaccine effectiveness, necessitating ongoing surveillance of this group A rotavirus subtype.
Area of Science:
- Virology
- Molecular Epidemiology
- Public Health
Background:
- Human group A rotaviruses predominantly feature the P[8] VP4 genotype.
- A distinct lineage, OP354-like P[8] (P[8]-4), has recently emerged globally.
- The circulation history and spread of OP354-like P[8] strains remain largely unknown.
Purpose of the Study:
- To investigate the evolutionary history and phylogeographic spread of OP354-like P[8] rotavirus strains.
- To determine the origin and migration patterns of this emerging rotavirus subtype.
- To assess potential implications for rotavirus vaccine effectiveness.
Main Methods:
- Phylogeographic analysis of 98 near-complete OP354-like P[8] VP4 gene sequences.
- Estimation of the time to the most recent common ancestor (TMRCA) for global and clustered strains.
- Analysis of VP7 gene segment reassortment in OP354-like P[8] strains.
Main Results:
- South and East Asia served as the primary source for OP354-like P[8] dissemination to other continents (Africa, Europe, North America) between 1988 and 2012.
- The TMRCA for all OP354-like P[8] genes was estimated at 1987, with major clusters emerging between 1996-2001.
- Frequent VP7 gene reassortment was observed, similar to other P[8] subtypes, indicating rapid evolution.
Conclusions:
- OP354-like P[8] rotavirus strains have achieved rapid global dispersal.
- The genetic distinctiveness of these strains may compromise existing rotavirus vaccine efficacy.
- Continuous surveillance of OP354-like P[8] is crucial, particularly in vaccinated populations.
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