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Updated: Apr 15, 2026

Identification of Cyclin-dependent Kinase 1 Specific Phosphorylation Sites by an In Vitro Kinase Assay
Published on: May 3, 2018
Casein kinase 2 (CK2) phosphorylates the deubiquitylase OTUB1 at Ser16 to trigger its nuclear localization
Lina Herhaus1, Ana B Perez-Oliva1, Giorgio Cozza2
1MRC Protein Phosphorylation and Ubiquitylation Unit, College of Life Sciences, University of Dundee, Dow Street, Dundee DD1 5EH, UK.
Abstract:
The deubiquitylating enzyme OTUB1 is present in all tissues and targets many substrates, in both the cytosol and nucleus. We found that casein kinase 2 (CK2) phosphorylated OTUB1 at Ser(16) to promote its nuclear accumulation in cells. Pharmacological inhibition or genetic ablation of CK2 blocked the phosphorylation of OTUB1 at Ser(16), causing its nuclear exclusion in various cell types. Whereas we detected unphosphorylated OTUB1 mainly in the cytosol, we detected Ser(16)-phosphorylated OTUB1 only in the nucleus. In vitro, Ser(16)-phosphorylated OTUB1 and nonphosphorylated OTUB1 exhibited similar catalytic activity, bound K63-linked ubiquitin chains, and interacted with the E2 enzyme UBE2N. CK2-mediated phosphorylation and subsequent nuclear localization of OTUB1 promoted the formation of 53BP1 (p53-binding protein 1) DNA repair foci in the nucleus of osteosarcoma cells exposed to ionizing radiation. Our findings indicate that the activity of CK2 is necessary for the nuclear translocation and subsequent function of OTUB1 in DNA damage repair.
Insights
Casein kinase 2 (CK2) phosphorylates OTUB1, a deubiquitylating enzyme, promoting its nuclear entry. This nuclear translocation is crucial for OTUB1
Area of Science:
- Biochemistry
- Molecular Biology
- Cell Biology
Background:
- OTUB1 is a deubiquitylating enzyme found in both cytosolic and nuclear compartments, targeting numerous substrates.
- The localization and regulation of OTUB1 activity are critical for cellular processes, including DNA repair.
Purpose of the Study:
- To investigate the role of casein kinase 2 (CK2) in regulating the cellular localization and function of OTUB1.
- To determine the impact of CK2-mediated OTUB1 phosphorylation on DNA damage repair pathways.
Main Methods:
- Utilized pharmacological inhibition and genetic ablation of CK2 in various cell types.
- Employed Western blotting and immunofluorescence to detect OTUB1 phosphorylation and localization.
- Performed in vitro assays to assess the catalytic activity and substrate binding of phosphorylated OTUB1.
- Analyzed the formation of 53BP1 DNA repair foci in osteosarcoma cells following ionizing radiation exposure.
Main Results:
- CK2 phosphorylates OTUB1 at Serine 16 (Ser16), a modification essential for its nuclear accumulation.
- Inhibition or genetic deletion of CK2 prevents OTUB1 phosphorylation at Ser16, leading to its exclusion from the nucleus.
- Phosphorylated OTUB1 exclusively localizes to the nucleus, while unphosphorylated OTUB1 is primarily cytosolic.
- Both phosphorylated and non-phosphorylated OTUB1 exhibit similar in vitro catalytic activity, ubiquitin chain binding, and UBE2N interaction.
- CK2-dependent nuclear translocation of OTUB1 enhances the formation of 53BP1 DNA repair foci in response to ionizing radiation.
Conclusions:
- CK2-mediated phosphorylation of OTUB1 at Ser16 is a key regulatory mechanism controlling its nuclear import.
- Nuclear localization of OTUB1, driven by CK2 activity, is necessary for efficient DNA damage repair.
- These findings highlight a critical interplay between CK2, OTUB1, and DNA repair pathways.
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