Related Experiment Video
Updated: Apr 14, 2026

Isotopic Effect in Double Proton Transfer Process of Porphycene Investigated by Enhanced QM/MM Method
Published on: July 19, 2019
Centrality measures highlight proton traps and access points to proton highways in kinetic Monte Carlo trajectories
Rachel A Krueger1, Frederick G Haibach2, Dana L Fry3
1Department of Chemistry, California Institute of Technology, Pasadena, California 91125, USA.
Abstract:
A centrality measure based on the time of first returns rather than the number of steps is developed and applied to finding proton traps and access points to proton highways in the doped perovskite oxides: AZr(0.875)D(0.125)O3, where A is Ba or Sr and the dopant D is Y or Al. The high centrality region near the dopant is wider in the SrZrO3 systems than the BaZrO3 systems. In the aluminum-doped systems, a region of intermediate centrality (secondary region) is found in a plane away from the dopant. Kinetic Monte Carlo (kMC) trajectories show that this secondary region is an entry to fast conduction planes in the aluminum-doped systems in contrast to the highest centrality area near the dopant trap. The yttrium-doped systems do not show this secondary region because the fast conduction routes are in the same plane as the dopant and hence already in the high centrality trapped area. This centrality measure complements kMC by highlighting key areas in trajectories. The limiting activation barriers found via kMC are in very good agreement with experiments and related to the barriers to escape dopant traps.
Related Concept Videos
Mass Analyzers: Common Types
Mass Analyzers: Overview
¹³C NMR: Distortionless Enhancement by Polarization Transfer (DEPT)
Proton (¹H) NMR: Chemical Shift
Absorption signals of all the protium nuclei...
Protein Networks
These interactions can be represented through maps depicting protein-protein interaction networks, represented as nodes and edges. Nodes are circles that are representative of a protein,...
High-Resolution Mass Spectrometry (HRMS)

