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New Insights into the Toxicity of n-Butanol to Trypsin: Spectroscopic and Molecular Docking Descriptions
Rui Zhang1, Tao Sun1, Chunguang Liu1
1School of Environmental Science and Engineering, Shandong University, China -America CRC for Environment & Health, Jinan, 250100, People's Republic of China.
Abstract:
n-Butanol has been widely used and its residue exists extensively in the environment. It could lead to conformational and functional changes of trypsin by forming a complex with it. Docking method and spectrographic technique were employed to the study of the complex of trypsin and n-butanol. The fluorescence results indicated that n-butanol can form a complex with trypsin and change the distance between tryptophan and fluorescence quenchers. The conformational changes of trypsin were proved by UV-visible absorption and synchronous fluorescence spectroscopy indicating that n-butanol had little effect on the conformation of trypsin at a low concentration while denatured and coagulated the trypsin at a high concentration. The binding site was displayed by molecular modeling, which gave information about distances and binding forces between n-butanol and trypsin. The results were in accordance with spectroscopic experiments. Besides, enzyme activity assay gave the dose-response relationship of n-butanol with trypsin.
Insights
n-Butanol forms a complex with trypsin, altering its structure and function. High concentrations denature trypsin, while molecular modeling reveals binding sites and forces, consistent with spectroscopic findings.
Area of Science:
- Biochemistry
- Environmental Chemistry
- Molecular Biology
Background:
- n-Butanol is a widely used chemical with environmental persistence.
- Its residues can interact with biological molecules like trypsin.
- Understanding these interactions is crucial for environmental and biochemical studies.
Purpose of the Study:
- To investigate the complex formation between n-butanol and trypsin.
- To elucidate the conformational and functional changes induced by n-butanol.
- To determine the binding site and forces involved in the interaction.
Main Methods:
- Spectroscopic techniques (fluorescence, UV-visible absorption, synchronous fluorescence)
- Molecular docking and modeling
- Enzyme activity assays
Main Results:
- n-Butanol forms a complex with trypsin, affecting tryptophan fluorescence.
- Low n-butanol concentrations minimally impact trypsin conformation; high concentrations cause denaturation.
- Molecular modeling identified binding sites and forces, corroborating spectroscopic data.
- Enzyme activity assays demonstrated a dose-dependent response.
Conclusions:
- n-Butanol interacts with trypsin, leading to concentration-dependent conformational and functional alterations.
- The study provides insights into the molecular mechanisms of n-butanol toxicity.
- Findings are relevant for assessing the environmental impact of n-butanol on biological systems.
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