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Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease
Published on: April 4, 2018
[Polymorphic variant of MnSOD A16V and risk of diabetic retinopathy]
Abstract:
Dabetic retinopatny Is the most common microvascular complication of diabetes and a leading cause of blindness in industrialized countries. Oxidative stress plays an important role in the development of microangiopathic complications in diabetes. Manganese superoxide dismutase (MnSOD) is a key mitochondrial antioxidant enzyme in the cellular defense against agents that induce oxidative stress. The aim of the present study was to assess whether the MnSODA16V (C47T) polymorphism is associated with Diabetic retinopathy in northern Iran. 140 patients with Diabetic retinopathy and 140 healthy individuals, aged 30 to 75 years old, participated in this study. For genotyping of the MnSOD A16V polymorphism, polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) method was used. The prevalence of genotype frequencies of AA, AV, VW in Diabetic retinopathy subject were 5.71, 71.43 and 22.86%, respectively while in controls were 21.43, 38.57 and 40%, respectively. Significantly increased frequency of AV genotype was observed in patients compared with controls (OR = 6.94, 95% CI = 2.98-16.20, P< 0.0001). In conclusion, it is suggested that the MnSOD A16V polymorphism may be associated with the risk of Diabetic retinopathy in northern Iran. However, larger population-based studies are needed for clarifying the relation between Diabetic retinopathy and MnSOD A16V polymorphism.
Insights
The Manganese Superoxide Dismutase (MnSOD) A16V polymorphism is linked to an increased risk of Diabetic Retinopathy in northern Iran. This genetic factor may contribute to the development of this diabetes complication.
Area of Science:
- Genetics and Molecular Biology
- Ophthalmology
- Endocrinology
Context:
- Diabetic retinopathy is a leading cause of blindness globally, stemming from diabetes complications.
- Oxidative stress is a significant factor in the microvascular damage seen in diabetes.
- Manganese superoxide dismutase (MnSOD) is a crucial mitochondrial enzyme involved in cellular defense against oxidative stress.
Purpose:
- To investigate the association between the MnSOD A16V (C47T) gene polymorphism and Diabetic Retinopathy in a northern Iranian population.
- To determine if specific MnSOD genotypes influence susceptibility to Diabetic Retinopathy.
Summary:
- This study analyzed 140 Diabetic Retinopathy patients and 140 healthy controls using PCR-RFLP to genotype the MnSOD A16V polymorphism.
- A significantly higher frequency of the AV genotype was found in Diabetic Retinopathy patients compared to controls (OR = 6.94, P<0.0001).
- Genotype frequencies differed significantly between cases and controls, with AA, AV, and VW genotypes showing distinct prevalence.
Impact:
- The findings suggest a potential genetic predisposition to Diabetic Retinopathy associated with the MnSOD A16V polymorphism in the studied Iranian population.
- Further large-scale population studies are warranted to confirm this association and elucidate the role of MnSOD in Diabetic Retinopathy pathogenesis.
- This research contributes to understanding the genetic underpinnings of diabetic microvascular complications.
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