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Updated: Apr 14, 2026

A Fluorescence-based Assay of Phospholipid Scramblase Activity
Published on: September 20, 2016
MurJ and a novel lipid II flippase are required for cell wall biogenesis in Bacillus subtilis
Alexander J Meeske1, Lok-To Sham1, Harvey Kimsey1
1Department of Microbiology and Immunobiology, Harvard Medical School, Boston, MA 02115; and.
Abstract:
Bacterial surface polysaccharides are synthesized from lipid-linked precursors at the inner surface of the cytoplasmic membrane before being translocated across the bilayer for envelope assembly. Transport of the cell wall precursor lipid II in Escherichia coli requires the broadly conserved and essential multidrug/oligosaccharidyl-lipid/polysaccharide (MOP) exporter superfamily member MurJ. Here, we show that Bacillus subtilis cells lacking all 10 MOP superfamily members are viable with only minor morphological defects, arguing for the existence of an alternate lipid II flippase. To identify this factor, we screened for synthetic lethal partners of MOP family members using transposon sequencing. We discovered that an uncharacterized gene amj (alternate to MurJ; ydaH) and B. subtilis MurJ (murJBs; formerly ytgP) are a synthetic lethal pair. Cells defective for both Amj and MurJBs exhibit cell shape defects and lyse. Furthermore, expression of Amj or MurJBs in E. coli supports lipid II flipping and viability in the absence of E. coli MurJ. Amj is present in a subset of gram-negative and gram-positive bacteria and is the founding member of a novel family of flippases. Finally, we show that Amj is expressed under the control of the cell envelope stress-response transcription factor σ(M) and cells lacking MurJBs increase amj transcription. These findings raise the possibility that antagonists of the canonical MurJ flippase trigger expression of an alternate translocase that can resist inhibition.
Insights
Researchers discovered a new bacterial lipid II flippase, Amj, which complements the essential MurJ flippase. This finding reveals an alternative pathway for cell wall precursor transport and potential drug targets.
Area of Science:
- Microbiology
- Molecular Biology
- Biochemistry
Background:
- Bacterial cell wall polysaccharides are synthesized via lipid-linked precursors.
- Transport of lipid II, a cell wall precursor, across the cytoplasmic membrane is crucial for bacterial envelope assembly.
- In Escherichia coli, this transport is primarily mediated by MurJ, an essential MOP exporter superfamily member.
Purpose of the Study:
- To identify alternative lipid II flippases in bacteria, as Bacillus subtilis lacking all MOP superfamily members remains viable.
- To investigate the function of the uncharacterized gene amj and its relationship with B. subtilis MurJ (MurJBs).
Main Methods:
- Transposon sequencing was employed to screen for synthetic lethal partners of MOP family members.
- Functional analysis of Amj and MurJBs in B. subtilis and E. coli.
- Gene expression analysis under the control of the sigma factor σ(M).
Main Results:
- Bacillus subtilis cells lacking all 10 MOP superfamily members show only minor morphological defects, indicating an alternative lipid II flippase.
- The uncharacterized gene amj and B. subtilis MurJ (MurJBs) form a synthetic lethal pair.
- Amj and MurJBs can functionally complement E. coli MurJ, supporting lipid II flipping and cell viability.
- Amj represents a novel family of flippases found in various bacteria.
- Amj expression is regulated by the cell envelope stress response factor σ(M), and its transcription increases in MurJBs-deficient cells.
Conclusions:
- A novel lipid II flippase, Amj, exists in bacteria, providing an alternative to the essential MurJ.
- Amj and MurJBs function redundantly, and their simultaneous absence leads to cell lysis.
- The discovery of Amj opens possibilities for targeting bacterial cell wall synthesis, potentially by inhibiting MurJ and inducing Amj expression.
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