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Related Concept Videos

Structure-Activity Relationships and Drug Design01:28

Structure-Activity Relationships and Drug Design

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Drug design is a dynamic field that involves discovering and developing new medications based on specific biological targets. This process heavily relies on structure-activity relationships (SAR) and quantitative structure-activity relationships (QSAR) to guide the design and optimization of efficient drugs.
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Adrenergic Agonists: Chemistry and Structure-Activity Relationship01:16

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Adrenergic agonists' structure-activity relationship (SAR) determines their selectivity and efficacy. These agonists comprise a phenylethylamine moiety with an aromatic ring and an ethylamine side chain.
Aromatic ring substitutions: Substituting the aromatic ring with –OH groups at positions 3 and 4 yields catecholamines (e.g., epinephrine), which have a high affinity for adrenoceptors. Hydrogen bonding between –OH groups and receptors enhances adrenergic activity.
Separation of...
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Direct-Acting Cholinergic Agonists: Chemistry and Structure-Activity Relationship01:22

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Cholinergic agonists or cholinomimetics mimic the action of acetylcholine to stimulate the parasympathetic nervous system. They are categorized into direct-acting and indirect-acting agents. The direct-acting cholinergic drugs induce the parasympathetic response by directly binding to the muscarinic or nicotine receptors. In comparison, the indirect-acting cholinergic drugs prevent acetylcholine hydrolysis, indirectly contributing to the extended parasympathetic response.
The direct-acting...
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Indirect-Acting Cholinergic Agonists: Chemistry and Structure-Activity Relationship01:29

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Indirect-acting cholinergic agonists are agents that interact with the acetylcholinesterase enzyme in the synaptic cleft, preventing the breakdown of acetylcholine into choline and acetate. Consequently, the concentration of acetylcholine in the synaptic cleft increases. These agonists can be classified into reversible and irreversible inhibitors based on their duration of action.
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ATP-binding cassette or ABC transporter is the largest superfamily of integral membrane proteins. The transporters have transmembrane-binding domains (TMDs) and nucleotide-binding domains (NBDs). The TMDs are specific to their substrates, whereas the NBDs are similar to engines that complete ATP hydrolysis to complete the substrate transport. They can be full transporters consisting of two TMDs and NBDs, half transporters with one TMD and NBD, while some encoded with a single TMD or NBD are...
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Cholinergic Antagonists: Chemistry and Structure-Activity Relationship01:29

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Cholinergic antagonists bind to cholinergic receptors and limit the effects of acetylcholine and other cholinergic agonists. Based on the specific cholinergic receptor affinity, these antagonists are classified as muscarinic or nicotinic. Anticholinergics interrupt parasympathetic innervations while sympathetic innervations remain uninterrupted. Muscarinic antagonists are also called 'muscarinic antagonists', 'antimuscarinics', or 'parasympatholytics'. Nicotinic...
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Related Experiment Video

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High-throughput Screening for Small-molecule Modulators of Inward Rectifier Potassium Channels
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Exploring the structure-activity relationships of ABCC2 modulators using a screening approach.

Gloria Wissel1, Pavel Kudryavtsev1, Leo Ghemtio1

  • 1Centre for Drug Research, Division of Pharmaceutical Biosciences, Faculty of Pharmacy, University of Helsinki, Viikinkaari 5E, 00790 Helsinki, Finland.

Bioorganic & Medicinal Chemistry
|May 4, 2015
PubMed
Summary

This study screened 432 compounds to find modulators of the ABCC2 transporter, identifying 16 low micromolar inhibitors. It provides the first detailed structure-activity relationships for ABCC2 modulation, aiding in understanding drug-drug interactions.

Keywords:
ABC transporterABCC2CDCFEffluxEstradiol glucuronideInhibitorMRP2Membrane vesiclesModulatorSVM modellingSf9StimulatorStructure–activity relationshipsTransportTransport assay

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Area of Science:

  • Pharmacology and Toxicology
  • Biochemistry
  • Medicinal Chemistry

Background:

  • The ABCC2 transporter significantly impacts drug pharmacokinetics in the liver and kidneys.
  • Understanding ABCC2 modulation is crucial for predicting and mitigating drug-drug interactions.

Purpose of the Study:

  • To explore structure-activity relationships (SAR) of compounds modulating ABCC2.
  • To identify novel ABCC2 inhibitors and gain insights into their mechanisms.

Main Methods:

  • Screening of 432 compounds using radiolabeled β-estradiol 17-(β-d-glucuronide) (EG) and fluorescent 5(6)-carboxy-2',7'-dichlorofluorescein (CDCF) transport assays in membrane vesicles.
  • Dose-response analysis of 86 selected compounds to determine IC50 values.
  • Development of 24 classification models using Support Vector Machine (SVM) and fused-XY Kohonen methods.

Main Results:

  • Identified 16 low micromolar inhibitors of ABCC2.
  • Detailed SAR data were generated for four compound series.
  • CDCF probe measurements were more robust than EG probe measurements; one compound showed probe selectivity.
  • Molecular descriptors related to ring count, solubility, and lipophilicity were identified as key for distinguishing inhibitors.

Conclusions:

  • This research provides the first detailed SAR for ABCC2 modulators.
  • The findings contribute to a better understanding of ABCC2 function and drug interactions.
  • The identified molecular descriptors can guide future drug design targeting ABCC2.