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Updated: Apr 13, 2026

Quantitative PCR-based Assay to Measure Sonic Hedgehog Signaling in Cellular Model of Ciliogenesis
Published on: January 31, 2025
Multisite interaction with Sufu regulates Ci/Gli activity through distinct mechanisms in Hh signal transduction
Yuhong Han1, Qing Shi1, Jin Jiang2
1Departments of Developmental Biology and.
Abstract:
The tumor suppressor protein Suppressor of fused (Sufu) plays a conserved role in the Hedgehog (Hh) signaling pathway by inhibiting Cubitus interruptus (Ci)/Glioma-associated oncogene homolog (Gli) transcription factors, but the molecular mechanism by which Sufu inhibits Ci/Gli activity remains poorly understood. Here we show that Sufu can bind Ci/Gli through a C-terminal Sufu-interacting site (SIC) in addition to a previously identified N-terminal site (SIN), and that both SIC and SIN are required for optimal inhibition of Ci/Gli by Sufu. We show that Sufu can sequester Ci/Gli in the cytoplasm through binding to SIN while inhibiting Ci/Gli activity in the nucleus depending on SIC. We also find that binding of Sufu to SIC and the middle region of Ci can impede recruitment of the transcriptional coactivator CBP by masking its binding site in the C-terminal region of Ci. Indeed, moving the CBP-binding site to an "exposed" location can render Ci resistant to Sufu-mediated inhibition in the nucleus. Hence, our study identifies a previously unidentified and conserved Sufu-binding motif in the C-terminal region of Ci/Gli and provides mechanistic insight into how Sufu inhibits Ci/Gli activity in the nucleus.
Insights
The tumor suppressor Suppressor of fused (Sufu) protein inhibits Hedgehog (Hh) pathway transcription factors. This study reveals Sufu uses two binding sites to control Ci/Gli activity in the cytoplasm and nucleus.
Area of Science:
- Molecular Biology
- Cell Biology
- Genetics
Background:
- The tumor suppressor protein Suppressor of fused (Sufu) is crucial for regulating the Hedgehog (Hh) signaling pathway.
- Sufu inhibits transcription factors Cubitus interruptus (Ci)/Glioma-associated oncogene homolog (Gli), but the precise mechanism is unclear.
Purpose of the Study:
- To elucidate the molecular mechanisms by which Sufu inhibits Ci/Gli activity.
- To identify novel Sufu-binding sites and their roles in regulating Ci/Gli function.
Main Methods:
- Co-immunoprecipitation assays to detect protein-protein interactions.
- Cellular localization studies to track Ci/Gli and Sufu.
- Functional assays to assess transcriptional activity and coactivator recruitment.
Main Results:
- Sufu binds Ci/Gli through both a previously known N-terminal site (SIN) and a newly identified C-terminal site (SIC).
- Both SIN and SIC are essential for Sufu's optimal inhibition of Ci/Gli.
- Sufu sequesters Ci/Gli in the cytoplasm via SIN, while SIC mediates nuclear inhibition by blocking CBP coactivator recruitment.
- A novel Sufu-binding motif was identified in the C-terminal region of Ci/Gli.
Conclusions:
- Sufu employs a dual-site binding mechanism (SIN and SIC) to regulate Ci/Gli activity.
- Sufu's inhibition involves cytoplasmic sequestration and nuclear interference with transcriptional coactivator binding.
- This provides key mechanistic insights into Sufu-mediated regulation of the Hedgehog pathway.
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