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Published on: November 10, 2023
Understanding different facets of cardiovascular diseases based on model systems to human studies: a proteomic and
Trayambak Basak1, Swati Varshney1, Shamima Akhtar2
1Genomics and Molecular Medicine Unit, CSIR-Institute of Genomics and Integrative Biology, Sukhdev Vihar, Mathura Road, New Delhi 110020, India; Academy of Scientific & Innovative Research (AcSIR), CSIR-IGIB South Campus, New Delhi, India.
Insights
Proteomics and metabolomics advance cardiovascular disease research by identifying biomarkers and elucidating disease mechanisms. These systems biology approaches offer new insights into complex cardiovascular disorders.
Area of Science:
- Biochemistry
- Genomics
- Systems Biology
Background:
- Cardiovascular diseases (CVDs) are a leading global cause of death.
- Identifying disease etiology and prognostic markers remains challenging.
- Advanced genomic, proteomic, and metabolomic tools are crucial for understanding CVDs.
Purpose of the Study:
- To review proteomics-based studies for cardiovascular disease biomarker discovery.
- To elucidate newer mechanistic insights into CVD pathophysiology.
- To provide a perspective on proteomics in combating cardiovascular diseases.
Main Methods:
- Review of recent proteomics and metabolomics studies.
- Analysis of protein interaction networks and metabolic rewiring.
- Utilizing advanced mass spectrometry for post-translational modification analysis.
Main Results:
- Proteomics has successfully identified potential prognostic and diagnostic markers for various CVDs.
- Studies have elucidated disease mechanisms through proteomic analysis.
- Next-generation approaches enable understanding of protein networks and metabolic changes in disease phenotypes.
Conclusions:
- Proteomics and metabolomics are vital components of a systems biology approach for understanding complex CVDs.
- These approaches aid in delineating disease pathways and developing prognostic biomarkers.
- Further research in proteomics holds significant potential for combating cardiovascular diseases.
Abstract:
Cardiovascular disease has remained as the largest cause of morbidity and mortality worldwide. From dissecting the disease aetiology to identifying prognostic markers for better management of the disease is still a challenge for researchers. In the post human genome sequencing era much of the thrust has been focussed towards application of advanced genomic tools along with evaluation of traditional risk factors. With the advancement of next generation proteomics and metabolomics approaches it has now become possible to understand the protein interaction network & metabolic rewiring which lead to the perturbations of the disease phenotype. Further, elucidating different post translational modifications using advanced mass spectrometry based methods have provided an impetus towards in depth understanding of the proteome. The past decade has observed a plethora of studies where proteomics has been applied successfully to identify potential prognostic and diagnostic markers as well as to understand the disease mechanisms for various types of cardiovascular diseases. In this review, we attempted to document relevant proteomics based studies that have been undertaken either to identify potential biomarkers or have elucidated newer mechanistic insights into understanding the patho-physiology of cardiovascular disease, primarily coronary artery disease, cardiomyopathy, and myocardial ischemia. We have also provided a perspective on the potential of proteomics in combating this deadly disease.
Biological Significance:
This review has catalogued recent studies on proteomics and metabolomics involved in understanding several cardiovascular diseases (CVDs). A holistic systems biology based approach, of which proteomics and metabolomics are two very important components, would help in delineating various pathways associated with complex disorders like CVD. This would ultimately provide better mechanistic understanding of the disease biology leading to development of prognostic biomarkers. This article is part of a Special Issue entitled: Proteomics in India.
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