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Co-immunoprecipitation Assay Using Endogenous Nuclear Proteins from Cells Cultured Under Hypoxic Conditions
Published on: August 2, 2018
Myeloid translocation gene-16 co-repressor promotes degradation of hypoxia-inducible factor 1
Parveen Kumar1, Urban Gullberg1, Inge Olsson1
1Department of Hematology, Lund University, Lund, Sweden.
Abstract:
The myeloid translocation gene 16 (MTG16) co-repressor down regulates expression of multiple glycolytic genes, which are targets of the hypoxia-inducible factor 1 (HIF1) heterodimer transcription factor that is composed of oxygen-regulated labile HIF1α and stable HIF1β subunits. For this reason, we investigated whether MTG16 might regulate HIF1 negatively contributing to inhibition of glycolysis and stimulation of mitochondrial respiration. A doxycycline Tet-On system was used to control levels of MTG16 in B-lymphoblastic Raji cells. Results from co-association studies revealed MTG16 to interact with HIF1α. The co-association required intact N-terminal MTG16 residues including Nervy Homology Region 1 (NHR1). Furthermore, electrophoretic mobility shift assays demonstrated an association of MTG16 with hypoxia response elements (HREs) in PFKFB3, PFKFB4 and PDK1 promoters in-vitro. Results from chromatin immunoprecipitation assays revealed co-occupancy of these and other glycolytic gene promoters by HIF1α, HIF1β and MTG16 in agreement with possible involvement of these proteins in regulation of glycolytic target genes. In addition, MTG16 interacted with prolyl hydroxylase D2 and promoted ubiquitination and proteasomal degradation of HIF1α. Our findings broaden the area of MTG co-repressor functions and reveal MTG16 to be part of a protein complex that controls the levels of HIF1α.
Insights
Myeloid translocation gene 16 (MTG16) co-repressor interacts with hypoxia-inducible factor 1 alpha (HIF1α), promoting its degradation. This reveals MTG16
Area of Science:
- Molecular Biology
- Cellular Metabolism
- Cancer Research
Background:
- Myeloid translocation gene 16 (MTG16) is a co-repressor that regulates gene expression.
- Hypoxia-inducible factor 1 (HIF1) is a transcription factor controlling glycolytic genes, crucial in cellular adaptation to low oxygen.
- The interplay between MTG16 and HIF1 in regulating glycolysis and mitochondrial respiration is not fully understood.
Purpose of the Study:
- To investigate the potential negative regulation of HIF1 by MTG16.
- To determine if MTG16 influences glycolysis and mitochondrial respiration through HIF1.
- To elucidate the molecular mechanisms underlying MTG16's role in HIF1 pathway.
Main Methods:
- Utilized a doxycycline Tet-On system to control MTG16 expression in Raji cells.
- Performed co-association studies, electrophoretic mobility shift assays (EMSAs), and chromatin immunoprecipitation (ChIP) assays.
- Investigated protein-protein interactions and DNA-binding activities related to MTG16 and HIF1.
Main Results:
- MTG16 was found to interact with HIF1α, requiring specific N-terminal residues (NHR1) of MTG16.
- MTG16 associated with hypoxia response elements (HREs) in glycolytic gene promoters (PFKFB3, PFKFB4, PDK1).
- MTG16 co-occupied glycolytic gene promoters with HIF1α and HIF1β, and promoted HIF1α ubiquitination and degradation via interaction with prolyl hydroxylase D2.
Conclusions:
- MTG16 negatively regulates HIF1α stability and activity, thereby inhibiting glycolysis.
- MTG16 is part of a protein complex that controls HIF1α levels, impacting cellular respiration.
- These findings expand the known functions of MTG co-repressors and highlight their role in metabolic regulation.
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