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Updated: Apr 12, 2026

Deep Proteome Profiling by Isobaric Labeling, Extensive Liquid Chromatography, Mass Spectrometry, and Software-assisted Quantification
Published on: November 15, 2017
Ultra-sensitive high performance liquid chromatography-laser-induced fluorescence based proteomics for clinical
Ajeetkumar Patil1, Sujatha Bhat2, Keerthilatha M Pai3
1Dept. of Atomic and Molecular Physics, Manipal University, Manipal, Karnataka, India.
A new ultra-sensitive high performance liquid chromatography-laser induced fluorescence (HPLC-LIF) method aids early cancer detection. This technique, combined with principal component analysis (PCA), accurately screens and stages various cancers using protein profiles.
Area of Science:
- Proteomics
- Biochemistry
- Analytical Chemistry
Background:
- Proteomics techniques are advancing for disease mechanism understanding.
- Existing methods include HPLC, 2D-gel electrophoresis, and mass spectrometry.
Purpose of the Study:
- To develop an ultra-sensitive HPLC-LIF technique for cancer screening and early detection.
- To utilize protein profiling of clinical samples for cancer staging.
Main Methods:
- Developed an ultra-sensitive high performance liquid chromatography-laser induced fluorescence (HPLC-LIF) technique.
- Analyzed over 300 protein profiles from clinical samples (serum, saliva, tissue).
- Employed principal component analysis (PCA) for objective classification of conditions.
Main Results:
- Achieved objective detection and classification of malignant, premalignant, and healthy conditions.
- Demonstrated high sensitivity with a limit of detection in the femto-mole range.
- Successfully applied HPLC-LIF and PCA for oral and cervical cancer diagnosis.
Conclusions:
- The developed HPLC-LIF combined with PCA is a sensitive proteomic method for cancer screening and diagnosis.
- This technique shows potential for routine use in early cancer detection and staging.
- The study contributes to the field of proteomics in India.
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