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Method to Visualize and Analyze Membrane Interacting Proteins by Transmission Electron Microscopy
Published on: March 5, 2017
Structural features and dynamic investigations of the membrane-bound cytochrome P450 17A1
Ying-Lu Cui1, Qiao Xue2, Qing-Chuan Zheng3
1International Joint Research Laboratory of Nano-micro Architecture Chemistry, State Key Laboratory of Theoretical and Computational Chemistry, Institute of Theoretical Chemistry, Jilin University, Changchun 130023, PR China.
Abstract:
Cytochrome P450 (CYP) 17A1 is a dual-function monooxygenase with a critical role in the synthesis of many human steroid hormones. The enzyme is an important target for treatment of breast and prostate cancers that proliferate in response to estrogens and androgens. Despite the crystallographic structures available for CYP17A1, no membrane-bound structural features of this enzyme at atomic level are available. Accumulating evidence has indicated that the interactions between bounded CYPs and membrane could contribute to the recruitment of lipophilic substrates. To this end, we have investigated the effects on structural characteristics in the presence of the membrane for CYP17A1. The MD simulation results demonstrate a spontaneous insertion process of the enzyme to the lipid. Two predominant modes of CYP17A1 in the membrane are captured, characterized by the depths of insertion and orientations of the enzyme to the membrane surface. The measured heme tilt angles show good consistence with experimental data, thereby verifying the validity of the structural models. Moreover, conformational changes induced by the membrane might have impact on the accessibility of the active site to lipophilic substrates. The dynamics of internal aromatic gate formed by Trp220 and Phe224 are suggested to regulate tunnel opening motions. The knowledge of the membrane binding characteristics could guide future experimental and computational works on membrane-bound CYPs so that various investigations of CYPs in their natural, lipid environment rather than in artificially solubilized forms may be achieved.
Insights
This study reveals how Cytochrome P450 (CYP) 17A1 inserts into lipid membranes, uncovering two distinct binding modes. These findings offer insights into enzyme function and cancer treatment strategies.
Area of Science:
- Biochemistry
- Structural Biology
- Computational Chemistry
Background:
- Cytochrome P450 (CYP) 17A1 is crucial for human steroid hormone synthesis.
- CYP 17A1 is a therapeutic target for hormone-dependent cancers like breast and prostate cancer.
- Understanding membrane-bound CYP 17A1 structure is vital for drug development.
Purpose of the Study:
- To investigate the structural characteristics and membrane interactions of CYP 17A1.
- To elucidate the enzyme's behavior within a lipid bilayer environment.
- To provide atomic-level insights into membrane-bound CYP structures.
Main Methods:
- Molecular Dynamics (MD) simulations were employed to model CYP 17A1 in a lipid membrane.
- Analysis of enzyme insertion, orientation, and conformational changes.
- Validation of structural models using experimental heme tilt angle data.
Main Results:
- MD simulations showed spontaneous insertion of CYP 17A1 into the lipid bilayer.
- Two primary binding modes were identified, differing in insertion depth and orientation.
- Membrane interactions may influence active site accessibility and substrate recruitment.
- Internal gate dynamics (Trp220, Phe224) were implicated in regulating substrate access.
Conclusions:
- The study provides novel atomic-level structural insights into membrane-bound CYP 17A1.
- Findings validate computational models against experimental data.
- Understanding membrane binding characteristics can guide future research on membrane-bound CYPs in their native environment.
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