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Updated: Feb 9, 2026

Production, Crystallization, and Structure Determination of the IKK-binding Domain of NEMO
Published on: December 28, 2019
Identification of a noncatalytic domain in AMP deaminase that influences binding to myosin
R Marquetant1, R L Sabina, E W Holmes
1Department of Medicine, Duke University Medical Center, Durham, North Carolina 27710.
Abstract:
AMP deaminase (AMP-D) plays a critical role in energy metabolism in skeletal muscle. Prior studies have demonstrated AMP-D binds to myosin heavy chain in vitro, and it decorates the end of the A band in the myofibril. The present study presents evidence that proteolytic removal of 14 kilodaltons, presumably from the carboxy terminus, of the native 80K peptide does not eliminate catalytic activity but this deletion has a pronounced influence on binding of AMP-D to myosin in the presence of ATP. Comparison of the sequence of the rat skeletal muscle form of AMP-D to that of yeast AMP-D demonstrates conservation of an ATP binding site in the carboxy-terminal domain of the rat protein. These results provide a mechanism for regulating binding of AMP-D to myosin heavy chain in response to changes in ATP concentration and suggest a potential function for AMP-D/myosin complex formation in myocytes.
Insights
AMP deaminase (AMP-D) enzyme activity is not lost when a portion is removed, but its binding to myosin in muscle cells changes with ATP levels. This suggests a new way AMP-D function is regulated.
Area of Science:
- Biochemistry
- Muscle Physiology
- Enzymology
Background:
- AMP deaminase (AMP-D) is crucial for skeletal muscle energy metabolism.
- AMP-D has been observed to bind myosin heavy chain in vitro and localize to the A band of myofibrils.
Purpose of the Study:
- To investigate the role of the carboxy-terminal domain of AMP-D in its interaction with myosin.
- To explore the influence of ATP concentration on AMP-D binding to myosin.
Main Methods:
- Proteolytic removal of 14 kilodaltons from the native 80K AMP-D peptide.
- Assessing catalytic activity of the modified AMP-D.
- Evaluating AMP-D binding to myosin in the presence of ATP.
- Comparing rat skeletal muscle AMP-D sequence with yeast AMP-D.
Main Results:
- Proteolytic removal of the carboxy-terminal 14 kDa from AMP-D did not abolish its catalytic activity.
- This deletion significantly altered AMP-D's binding affinity to myosin in the presence of ATP.
- Sequence analysis revealed a conserved ATP binding site in the carboxy-terminal domain of rat AMP-D.
Conclusions:
- A mechanism for regulating AMP-D binding to myosin heavy chain via ATP concentration is proposed.
- The formation of an AMP-D/myosin complex may have a functional role in myocytes.
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