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Updated: Apr 10, 2026

A Practical Guide to Phylogenetics for Nonexperts
Published on: February 5, 2014
Which Phylogenetic Networks are Merely Trees with Additional Arcs?
Andrew R Francis1, Mike Steel2
1Centre for Research in Mathematics, School of Computing, Engineering and Mathematics, University of Western Sydney, Australia;
Abstract:
A binary phylogenetic network may or may not be obtainable from a tree by the addition of directed edges (arcs) between tree arcs. Here, we establish a precise and easily tested criterion (based on "2-SAT") that efficiently determines whether or not any given network can be realized in this way. Moreover, the proof provides a polynomial-time algorithm for finding one or more trees (when they exist) on which the network can be based. A number of interesting consequences are presented as corollaries; these lead to some further relevant questions and observations, which we outline in the conclusion.
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