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Updated: Apr 10, 2026

Automated Robotic Liquid Handling Assembly of Modular DNA Devices
Published on: December 1, 2017
No training required: experimental tests support homology-based DNA assembly as a best practice in synthetic biology
Afnan Azizi1,2, Wilson Lam1,3, Hilary Phenix1,2
1Ottawa Institute of Systems Biology, 451 Smyth Road, K1H 8M5 Ottawa, Ontario Canada.
Abstract:
The Registry of Standard Biological Parts imposes sequence constraints to enable DNA assembly using restriction enzymes. Alnahhas et al. (Journal of Biological Engineering 2014, 8:28) recently argued that these constraints should be revised because they impose an unnecessary burden on contributors that use homology-based assembly. To add to this debate, we tested four different homology-based methods, and found that students using these methods on their first attempt have a high probability of success. Because of their ease of use and high success rates, we believe that homology-based assembly is a best practice of Synthetic Biology, and recommend that the Registry implement the changes proposed by Alnahhas et al. to better support their use.
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