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Site-specific Bacterial Chromosome Engineering: ΦC31 Integrase Mediated Cassette Exchange (IMCE)
Published on: March 16, 2012
pKBuS13, a KPC-2-encoding plasmid from Klebsiella pneumoniae sequence type 833, carrying Tn4401b inserted into an Xer
Luigi Garbari1, Marina Busetti2, Lucilla Dolzani1
1Department of Life Sciences, University of Trieste, Trieste, Italy.
Abstract:
Here, we report the first detection of a Klebsiella pneumoniae carbapenemase 2 (KPC-2)-producing Klebsiella pneumoniae strain belonging to sequence type 833 (ST833), collected in an Italian hospital from a patient coming from South America. Its bla KPC determinant was carried by a ColE1 plasmid, pKBuS13, that showed the Tn4401b::bla KPC-2 transposon inserted into the regulatory region of an Xer site-specific recombination locus. This interfered with the correct resolution of plasmid multimers into monomers, lowering plasmid stability and leading to overestimation of the number of plasmids harbored by a single host cell. Sequencing of the fragments adjacent to Tn4401b detected a region that did not have significant matches in databases other than the genome of a carbapenem-resistant Escherichia coli strain collected during the same year at a hospital in Boston. This is interesting in an epidemiologic context, as it suggests that despite the absence of tra genes and the instability under nonselective conditions, the circulation of pKBuS13 or of analogous plasmids might be wider than reported.
Insights
This study identifies the first Klebsiella pneumoniae carbapenemase 2 (KPC-2)-producing Klebsiella pneumoniae strain (ST833) in Italy. The bla KPC gene
Area of Science:
- Microbiology
- Genetics
- Epidemiology
Background:
- Klebsiella pneumoniae is a significant cause of hospital-acquired infections.
- Carbapenemase-producing Enterobacteriaceae (CPE) pose a global health threat due to limited treatment options.
- Klebsiella pneumoniae carbapenemase 2 (KPC-2) is a prevalent carbapenemase enzyme.
Purpose of the Study:
- To report the first detection of a KPC-2-producing Klebsiella pneumoniae strain belonging to sequence type 833 (ST833).
- To characterize the genetic environment of the bla KPC determinant.
- To investigate the potential epidemiological implications of the findings.
Main Methods:
- Whole-genome sequencing of the Klebsiella pneumoniae isolate.
- Plasmid analysis and characterization.
- Bioinformatic analysis of genetic elements and sequence homology.
Main Results:
- Identification of a KPC-2-producing Klebsiella pneumoniae ST833 strain from an Italian hospital, with patient origin from South America.
- The bla KPC-2 determinant was located on a ColE1 plasmid (pKBuS13) within the Tn4401b transposon.
- Insertion of Tn4401b into an Xer site-specific recombination locus affected plasmid stability and multimer resolution.
- Adjacent sequences to Tn4401b showed homology to a carbapenem-resistant Escherichia coli strain from Boston, suggesting wider plasmid circulation.
Conclusions:
- This finding highlights the emergence and spread of KPC-2-producing Klebsiella pneumoniae ST833 in Italy.
- The genetic context of the bla KPC-2 gene on pKBuS13 may influence plasmid stability and detection.
- The observed sequence homology suggests potential international dissemination of this plasmid or related elements, warranting further epidemiological surveillance.
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