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Updated: Oct 2, 2026

Three-dimensional Confocal Analysis of Microglia/macrophage Markers of Polarization in Experimental Brain Injury
Published on: September 4, 2013
Differential Activation of Infiltrating Monocyte-Derived Cells After Mild and Severe Traumatic Brain Injury
Diane M Trahanas1, Carla M Cuda, Harris Perlman
1*Department of Surgery, Division of Trauma and Critical Care, and †Department of Medicine, Division of Rheumatology, Northwestern University, Chicago, Illinois.
Abstract:
Microglia are the resident innate immune cells of the brain. Although embryologically and functionally distinct, they are morphologically similar to peripheral monocyte-derived cells, resulting in a poor ability to discriminate between the two cell types. The purpose of this study was to develop a rapid and reliable method to simultaneously characterize, quantify, and discriminate between whole populations of myeloid cells from the brain in a murine model of traumatic brain injury. Male C57BL/6 mice underwent traumatic brain injury (n = 16) or sham injury (n = 14). Brains were harvested at 24 h after injury. Multiparameter flow cytometry and sequential gating analysis were performed, allowing for discrimination between microglia and infiltrating leukocytes as well as for the characterization and quantification of individual subtypes within the infiltrating population. The proportion of infiltrating leukocytes within the brain increased with the severity of injury, and the predominant cell types within the infiltrating population were monocyte derived (P = 0.01). In addition, the severity of injury altered the overall makeup of the infiltrating monocyte-derived cells. In conclusion, we describe a flow cytometry-based technique for gross discrimination between infiltrating leukocytes and microglia as well as the ability to simultaneously characterize and quantify individual myeloid subtypes and their maturation states within these populations.
Insights
This study introduces a flow cytometry method to distinguish brain microglia from infiltrating immune cells after traumatic brain injury. The technique quantifies myeloid cell subtypes, revealing increased monocyte infiltration with injury severity.
Area of Science:
- Neuroimmunology
- Brain Injury Research
- Innate Immune Cells
Background:
- Microglia are brain's resident immune cells, often confused with peripheral monocyte-derived cells.
- Distinguishing these cell types is crucial for understanding brain inflammation and injury responses.
Purpose of the Study:
- To develop a rapid, reliable method for discriminating microglia from infiltrating leukocytes in the brain.
- To simultaneously characterize and quantify myeloid cell populations after traumatic brain injury (TBI).
Main Methods:
- Utilized multiparameter flow cytometry and sequential gating analysis in a murine TBI model.
- Analyzed brain tissue harvested 24 hours post-injury from TBI and sham-injured mice.
- Enabled discrimination between microglia and infiltrating leukocytes and characterization of infiltrating subtypes.
Main Results:
- The proportion of infiltrating leukocytes in the brain increased with TBI severity.
- Monocyte-derived cells were the predominant cell type within the infiltrating leukocyte population.
- Injury severity modulated the composition of infiltrating monocyte-derived cells.
Conclusions:
- A flow cytometry technique was established to differentiate microglia from infiltrating leukocytes.
- This method allows simultaneous characterization and quantification of myeloid subtypes and their maturation states.
- The findings provide a tool for studying myeloid cell dynamics in TBI.
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