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Updated: Apr 9, 2026

DNA Sequence Recognition by DNA Primase Using High-Throughput Primase Profiling
Published on: October 8, 2019
A primase subunit essential for efficient primer synthesis by an archaeal eukaryotic-type primase
Bing Liu1, Songying Ouyang2, Kira S Makarova3
1State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, No. 1 West Beichen Road, Chaoyang District, Beijing 100101, China.
Researchers discovered PriX, a new essential protein in archaea that works with PriS and PriL to form a stable complex for DNA primer synthesis. This finding sheds light on archaeal DNA replication mechanisms.
Area of Science:
- Molecular Biology
- Archaea Biology
- Biochemistry
Background:
- Archaea utilize a eukaryotic-type primase composed of catalytic (PriS) and noncatalytic (PriL) subunits.
- The precise composition and function of archaeal primase complexes are not fully elucidated.
Purpose of the Study:
- To identify and characterize novel components of the archaeal primase complex.
- To investigate the role of these components in DNA replication.
Main Methods:
- Protein identification and characterization in Sulfolobus solfataricus.
- Crystallographic analysis and sequence comparisons.
- Phylogenomic analysis.
- Biochemical assays for nucleotide substrate affinity and primer synthesis activity.
Main Results:
- A new essential primase noncatalytic subunit, PriX, was identified in Sulfolobus solfataricus.
- PriX is a diverged homologue of PriL's C-terminal domain and lacks an iron-sulfur cluster.
- PriX, PriL, and PriS form a stable heterotrimer (PriSLX) with enhanced nucleotide substrate affinity and primer synthesis activity compared to the PriSL heterodimer.
- PriL, but not PriX, facilitates primer extension by PriS.
Conclusions:
- PriX is essential for archaeal survival and plays a crucial role in DNA primer synthesis.
- The formation of the PriSLX complex enhances primase activity.
- The catalytic activity of PriS is modulated by interactions with both PriL and PriX.
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