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Published on: August 4, 2018
Function and evolution of Magnaporthe oryzae avirulence gene AvrPib responding to the rice blast resistance gene Pib
Shulin Zhang1, Ling Wang1, Weihuai Wu2
1State Key Laboratory for Conservation and Utilization of Subtropical Agrobioresurces, and Guangdong Provincial Key Laboratory for Microbe Signals and Crop Disease Control, South China Agricultural University, Guangzhou, 510642, China.
Abstract:
Magnaporthe oryzae (Mo) is the causative pathogen of the damaging disease rice blast. The effector gene AvrPib, which confers avirulence to host carrying resistance gene Pib, was isolated via map-based cloning. The gene encodes a 75-residue protein, which includes a signal peptide. Phenotyping and genotyping of 60 isolates from each of five geographically distinct Mo populations revealed that the frequency of virulent isolates, as well as the sequence diversity within the AvrPib gene increased from a low level in the far northeastern region of China to a much higher one in the southern region, indicating a process of host-driven selection. Resequencing of the AvrPiballele harbored by a set of 108 diverse isolates revealed that there were four pathoways, transposable element (TE) insertion (frequency 81.7%), segmental deletion (11.1%), complete absence (6.7%), and point mutation (0.6%), leading to loss of the avirulence function. The lack of any TE insertion in a sample of non-rice infecting Moisolates suggested that it occurred after the host specialization of Mo. Both the deletions and the functional point mutation were confined to the signal peptide. The reconstruction of 16 alleles confirmed seven functional nucleotide polymorphisms for the AvrPiballeles, which generated three distinct expression profiles.
Insights
Magnaporthe oryzae
Area of Science:
- Plant Pathology
- Molecular Biology
- Genetics
Background:
- Magnaporthe oryzae causes rice blast, a devastating plant disease.
- The AvrPib effector gene confers avirulence in rice plants with the Pib resistance gene.
Purpose of the Study:
- To investigate the genetic diversity and evolution of the AvrPib gene in Magnaporthe oryzae populations.
- To understand the mechanisms of virulence evolution in rice blast pathogen.
Main Methods:
- Map-based cloning of the AvrPib gene.
- Phenotypic and genotypic analysis of 60 Magnaporthe oryzae isolates from five distinct Chinese populations.
- Resequencing of the AvrPib allele in 108 diverse isolates.
- Reconstruction of 16 AvrPib alleles.
Main Results:
- AvrPib gene diversity and virulence frequency increased from northeastern to southern China, indicating host-driven selection.
- Four major pathways (transposable element insertion, segmental deletion, complete absence, point mutation) lead to loss of AvrPib avirulence function, with TE insertion being the most frequent (81.7%).
- Deletions and functional point mutations were localized to the signal peptide region of the AvrPib protein.
Conclusions:
- Host-driven selection shapes the evolution of Magnaporthe oryzae virulence.
- Multiple genetic mechanisms contribute to the loss of AvrPib function, facilitating pathogen adaptation.
- The evolution of virulence mechanisms in Magnaporthe oryzae is linked to host specialization.
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