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Updated: Apr 8, 2026

Functional Characterization of Endogenously Expressed Human RYR1 Variants
Published on: June 9, 2021
A novel missense mutation of RYR1 in familial idiopathic hyper CK-emia
Ken Sano1, Shiroh Miura1, Toshiya Fujiwara2
1Division of Genomics, Medical Institute of Bioregulation, Kyushu University, Japan; Division of Respirology, Neurology and Rheumatology, Department of Medicine, Kurume University School of Medicine, Japan.
Insights
A novel RYR1 gene variant (c.7034G>C, p.S2345T) is linked to idiopathic hyper creatine kinase (IHCK) in a Japanese family. This genetic mutation reduces RYR1 protein and mRNA levels, suggesting a dominant negative effect contributing to IHCK.
Area of Science:
- Genetics
- Molecular Biology
- Biochemistry
Background:
- Idiopathic hyper creatine kinase (IHCK) is defined by persistently elevated serum creatine kinase (CK) levels without apparent symptoms.
- Familial forms of IHCK suggest a genetic basis, necessitating the identification of causative genes.
Purpose of the Study:
- To investigate the genetic underpinnings of familial idiopathic hyper creatine kinase (IHCK) in a Japanese pedigree.
- To identify specific genetic variants associated with IHCK and elucidate their functional impact.
Main Methods:
- Conducted a four-generation pedigree analysis using multipoint linkage analysis.
- Performed exome sequencing to identify genetic variants, followed by filtering processes.
- Validated the identified variant's association with IHCK through cosegregation analysis and in silico predictions (Mutation Taster, PolyPhen-2, PANTHER).
- Assessed RYR1 gene and protein expression levels in patient biopsy samples using immunohistochemistry, Western blotting, and real-time RT-PCR.
Main Results:
- Identified a novel heterozygous nonsynonymous single nucleotide variant (SNV), c.7034G>C, p.S2345T, in the RYR1 gene that cosegregated with IHCK in the pedigree.
- In silico analyses predicted the SNV as disease-causing and damaging.
- Confirmed the SNV's absence in 511 healthy Japanese individuals, ruling out a common polymorphism.
- Demonstrated significantly reduced RYR1 protein and mRNA expression levels in patients carrying the variant.
Conclusions:
- The novel RYR1 SNV (c.7034G>C, p.S2345T) is strongly associated with idiopathic hyper creatine kinase (IHCK).
- The identified variant likely contributes to IHCK pathogenesis through a dominant negative effect, leading to reduced RYR1 expression.
- This study identifies RYR1 as a gene responsible for certain forms of IHCK.
Abstract:
Persistent elevation of serum creatine kinase (CK) without any symptoms has been called idiopathic hyper CK-emia (IHCK). We examined a four-generation Japanese pedigree of familial IHCK. The multipoint linkage analysis of the pedigree showed seven clear peaks of logarithm of odds (LOD) scores (>1.4). By the exome sequencing followed by multiple filtering processes, we identified one novel heterozygous nonsynonymous single nucleotide variant (SNV), c.7034G>C, p.S2345T in the ryanodine receptor 1 gene, RYR1 cosegregated with IHCK in the pedigree. Mutation Taster predicted this substitution as "disease causing" (p=0.999). The PolyPhen-2 and PANTHER subPSEC scores for the substitution are 0.911 (possibly damaging) and -3.56 (probably damaging), respectively. We confirmed the absence of the SNV in 511 healthy Japanese individuals excluding the possibility of a normal variant with a very low frequency. Immunohistochemistry and Western blotting of biopsy samples consistently showed the expression level of RYR1 reduced in the patient. In real-time RT-PCR, the mRNA expression level of RYR1 was also significantly reduced in the patient (p=0.009). These results suggest that the novel nonsynonymous SNV contribute to the vulnerability of the RYR1 protein through the dominant negative effect. We conclude that the SNV in the RYR1 gene is one of the responsible genes of IHCK.
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