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Genotyping and Quantification of In Situ Hybridization Staining in Zebrafish
Published on: January 28, 2020
ELISA based quantification of Pax6 expression in the developing Zebrafish embryos
Rajaretinam R Kannan1, Samuel Gp Vincent2
1International Centre for Nanobiotechnology (ICN), Centre for Marine Science and Technology (CMST), Manonmaniam Sundaranar University, Rajakkamangalam, Kanyakumari Dist-629502, Tamil Nadu, India ; Centre for Nanoscience and Nanotechnology (CNSNT), Sathyabama University, Jeppiaar Nagar, Chennai - 600119, Tamil Nadu, INDIA.
This study developed a quantitative assay to measure Pax6 transcription factor expression in zebrafish embryos. The assay detected maximum Pax6 levels at 8 hours post-fertilization, aiding developmental studies.
Area of Science:
- Developmental Biology
- Molecular Biology
- Biochemistry
Background:
- Transcription factors regulate key metabolic pathways and organ development during embryogenesis.
- Pax6 is a crucial transcription factor for vertebrate eye, brain, and central nervous system formation.
Purpose of the Study:
- To develop a sensitive and reliable quantitative assay for Pax6 expression in zebrafish embryos.
- To enable spatiotemporal expression analysis of Pax6 during zebrafish development.
Main Methods:
- Purification of Pax6 from zebrafish embryos using heparin agarose and DEAE cellulose chromatography.
- Confirmation of protein purity via SDS-PAGE and Western blotting.
- Quantification of Pax6 expression across 17 developmental stages using indirect ELISA.
Main Results:
- Maximum Pax6 expression observed at 8 hours post-fertilization (hpf).
- Quantified Pax6 levels at 179 ng/embryo (average total protein 9.5 µg/embryo).
- Confirmed zebrafish Pax6 protein size at 48 kDa via Western blotting.
Conclusions:
- This study establishes a method for quantifying transcription factor levels during early embryonic development in zebrafish.
- The developed assay provides a valuable tool for studying gene expression dynamics in developmental models.
- Facilitates research into the roles of proteins and transcription factors in embryogenesis.
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