First assembly times and equilibration in stochastic coagulation-fragmentation.
Maria R D'Orsogna1, Qi Lei2, Tom Chou1
1Department of Biomathematics, UCLA, Los Angeles, California 90095-1766, USA.
The Journal of Chemical Physics
|July 10, 2015
Summary
We present a stochastic theory for coagulation and fragmentation (CF) in finite systems. Our findings reveal limitations of classical mass-action models in predicting cluster distributions and assembly times.
Area of Science:
- Physical Chemistry
- Statistical Mechanics
- Complex Systems
Background:
- Coagulation and fragmentation (CF) processes are fundamental in various scientific fields.
- Classical mass-action models often simplify these processes, potentially overlooking stochastic effects.
- Finite systems with size constraints introduce complexities not fully captured by traditional models.
Purpose of the Study:
- To develop a fully stochastic theory for CF in finite systems with a maximum cluster size.
- To derive analytical results for equilibrium cluster distributions and mean assembly times.
- To compare stochastic predictions with classical mass-action models.
Main Methods:
- Development of a high-dimensional master equation for cluster configurations.
- Exact analytical solutions for equilibrium cluster distributions under specific conditions.
- State-space enumeration to determine mean assembly times.
Main Results:
- A broader mean cluster-size distribution than predicted by mass-action models when coagulation dominates and system mass is indivisible by the maximum cluster size.
- Identification of conditions that accelerate equilibration and prevent late-stage coarsening.
- Derivation of scaling laws for mean assembly times, showing CF accelerates assembly only in specific cases.
Conclusions:
- Stochastic effects significantly influence cluster distributions and assembly dynamics in finite CF systems.
- Classical mass-action models can fail to accurately describe self-assembly under certain conditions.
- A high-dimensional discrete stochastic model is crucial for accurately capturing these phenomena.
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