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Published on: April 14, 2015
Composition dependent multiple structural transformations of myoglobin in aqueous ethanol solution: a combined
R Ghosh1, R N Samajdar1, Aninda Jiban Bhattacharyya1
1Solid State and Structural Chemistry Unit, Indian Institute of Science, Bangalore 560012, India.
Myoglobin undergoes significant structural changes in ethanol-water mixtures, revealing distinct partially folded states and a molten globule intermediate. These protein conformational shifts are influenced by ethanol concentration.
Area of Science:
- Biophysics
- Protein structural dynamics
- Solution chemistry
Background:
- Proteins exhibit complex conformational behavior in mixed solvent systems.
- Understanding protein structure in non-native environments is crucial for biochemistry.
- Aqueous ethanol mixtures are known to induce structural transformations.
Purpose of the Study:
- To investigate the structural transformations of myoglobin in aqueous ethanol mixtures.
- To identify specific ethanol concentrations that induce significant conformational changes.
- To characterize the intermediate states formed during these transformations.
Main Methods:
- Combined experimental techniques: circular dichroism and UV-Vis absorption spectroscopy.
- Large-scale atomistic molecular dynamics simulations.
- Order parameter analyses including radius of gyration and contact order.
Main Results:
- Identified two distinct structural regimes at xEtOH ~ 0.05 and xEtOH ~ 0.25, with a partially unfolded intermediate at xEtOH ~ 0.15.
- Observed non-monotonic composition dependence for radius of gyration, contact order, solvent accessible surface area, and spectral properties.
- Characterized the intermediate state at xEtOH ~ 0.15 as a molten globule based on minimum contact order parameter.
Conclusions:
- Ethanol-water mixtures induce remarkable and unforeseen structural transformations in myoglobin.
- The protein's conformation and dynamics are strongly affected by the binary mixture composition.
- Comparison with water-dimethyl sulfoxide mixtures suggests general principles for co-solvent effects on protein structure.
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