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Quantification of Optic Nerve Cross Sectional Area on MRI: A Novel Protocol using Fiji Software
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Robust optic nerve segmentation on clinically acquired computed tomography.

Robert L Harrigan1, Swetasudha Panda1, Andrew J Asman1

  • 1Vanderbilt University , Department of Electrical Engineering, Nashville, Tennessee 37235, United States.

Journal of Medical Imaging (Bellingham, Wash.)
|July 10, 2015
PubMed
Summary
This summary is machine-generated.

Automated segmentation of the optic nerve (ON) and surrounding structures using a multi-atlas CT framework achieved high accuracy. This method shows promise for understanding ON diseases and improving patient care.

Keywords:
computed tomographylabel fusionmulti-atlasoptic nervesegmentation

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Area of Science:

  • Medical imaging
  • Neuroscience
  • Ophthalmology

Background:

  • The optic nerve (ON) is crucial in various pathological conditions.
  • Accurate segmentation of the ON aids in understanding its development and disease progression.
  • Current automated segmentation methods for the ON have limitations.

Purpose of the Study:

  • To optimize registration and fusion methods for a novel multi-atlas framework.
  • To achieve automated segmentation of the optic nerve, eye globes, and muscles from CT data.
  • To evaluate the robustness and accuracy of the proposed framework.

Main Methods:

  • A multi-atlas approach involving affine and nonrigid registration.
  • Statistical fusion of segmented results from multiple atlases.
  • Utilized ANTS Symmetric Normalization registration and NMI-STAPLE fusion.
  • Evaluated on 501 CT scan volumes from thyroid eye disease patients.

Main Results:

  • The optimized multi-atlas framework achieved a median Dice similarity coefficient of 0.77 for ON segmentation.
  • Performance is comparable to inter-rater human reproducibility (0.73).
  • Identified optimal registration and fusion techniques among 18 compared methods.

Conclusions:

  • The developed multi-atlas framework enables robust and accurate automated segmentation of the optic nerve and related structures on CT scans.
  • This automated approach has significant potential for clinical applications in diagnosing and monitoring ON pathologies.
  • The findings advance the field of medical image analysis for neurological and ophthalmological conditions.