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Using Amplicon Sequencing To Characterize and Monitor Bacterial Diversity in Drinking Water Distribution Systems
Jennifer L A Shaw1, Paul Monis2, Laura S Weyrich1
1Australian Centre for Ancient DNA, University of Adelaide, Adelaide, South Australia, Australia.
Applied and Environmental Microbiology
|July 12, 2015
Summary
Metagenomic amplicon sequencing reveals bacterial community dynamics in drinking water distribution systems (DWDSs). This method complements traditional assessments by identifying microbial repopulation and disinfection-resistant species impacting water quality.
Area of Science:
- Environmental Microbiology
- Water Quality Management
- Molecular Biology
Background:
- Traditional drinking water assessments rely on limited microbial, physical, and chemical indicators.
- These indicators fail to characterize complex bacterial communities impacting drinking water distribution systems (DWDSs).
- Targeted metagenomic amplicon sequencing offers a rapid and cost-effective approach to study entire bacterial communities.
Purpose of the Study:
- To assess the bacterial communities in two distinct full-scale DWDSs using 16S rRNA gene sequencing.
- To compare the effectiveness of different water treatment regimes on bacterial communities.
- To understand bacterial repopulation and interactions within DWDSs.
Main Methods:
- Conducted 16S rRNA gene amplicon sequencing alongside traditional water quality measurements.
- Analyzed bacterial communities in two full-scale DWDSs with different treatment strategies.
- Investigated microbial profiles in relation to water chemistry and disinfection byproducts.
Main Results:
- Bacterial communities significantly shifted post-disinfection in both DWDSs.
- Bacterial repopulation was observed downstream, with some end-user samples resembling source water.
- Nitrification was detected in three locations, and disinfection-resistant genera like Burkholderiales were abundant.
- Pathogenic and fecal-associated bacterial genera were identified in several samples.
Conclusions:
- Metagenomic amplicon sequencing is a valuable tool for understanding DWDS bacterial ecology.
- This method complements traditional compliance-based monitoring.
- It provides insights into bacterial community interactions with water treatment and distribution environments.
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