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Published on: July 17, 2020
B56δ-related protein phosphatase 2A dysfunction identified in patients with intellectual disability
Abstract:
Here we report inherited dysregulation of protein phosphatase activity as a cause of intellectual disability (ID). De novo missense mutations in 2 subunits of serine/threonine (Ser/Thr) protein phosphatase 2A (PP2A) were identified in 16 individuals with mild to severe ID, long-lasting hypotonia, epileptic susceptibility, frontal bossing, mild hypertelorism, and downslanting palpebral fissures. PP2A comprises catalytic (C), scaffolding (A), and regulatory (B) subunits that determine subcellular anchoring, substrate specificity, and physiological function. Ten patients had mutations within a highly conserved acidic loop of the PPP2R5D-encoded B56δ regulatory subunit, with the same E198K mutation present in 6 individuals. Five patients had mutations in the PPP2R1A-encoded scaffolding Aα subunit, with the same R182W mutation in 3 individuals. Some Aα cases presented with large ventricles, causing macrocephaly and hydrocephalus suspicion, and all cases exhibited partial or complete corpus callosum agenesis. Functional evaluation revealed that mutant A and B subunits were stable and uncoupled from phosphatase activity. Mutant B56δ was A and C binding-deficient, while mutant Aα subunits bound B56δ well but were unable to bind C or bound a catalytically impaired C, suggesting a dominant-negative effect where mutant subunits hinder dephosphorylation of B56δ-anchored substrates. Moreover, mutant subunit overexpression resulted in hyperphosphorylation of GSK3β, a B56δ-regulated substrate. This effect was in line with clinical observations, supporting a correlation between the ID degree and biochemical disturbance.
Insights
Inherited protein phosphatase 2A (PP2A) dysregulation, caused by mutations in its regulatory and scaffolding subunits, leads to intellectual disability (ID). These mutations impair phosphatase activity, affecting key cellular processes and correlating with ID severity.
Area of Science:
- Neurogenetics
- Molecular Biology
- Biochemistry
Background:
- Intellectual disability (ID) is a complex neurodevelopmental disorder with diverse genetic etiologies.
- Protein phosphatase 2A (PP2A) is a crucial enzyme regulating numerous cellular processes through dephosphorylation.
- Dysregulation of PP2A activity has been implicated in various neurological conditions.
Purpose of the Study:
- To investigate the role of inherited protein phosphatase activity dysregulation in intellectual disability.
- To identify specific mutations in PP2A subunits causing intellectual disability and associated phenotypes.
- To elucidate the molecular mechanisms by which these mutations lead to impaired PP2A function.
Main Methods:
- Genetic analysis of individuals with intellectual disability to identify de novo missense mutations in PP2A subunits (PPP2R5D and PPP2R1A).
- Functional assays to assess the stability, subunit binding, and catalytic activity of mutant PP2A components.
- Analysis of downstream signaling pathways, including GSK3β phosphorylation, in response to mutant PP2A subunits.
Main Results:
- Identified de novo missense mutations in the B56δ (PPP2R5D) and Aα (PPP2R1A) subunits of PP2A in 16 individuals with ID.
- Mutations in the B56δ subunit (E198K) and Aα subunit (R182W) were recurrent.
- Mutant PP2A subunits exhibited impaired phosphatase activity, defective subunit interactions, and led to hyperphosphorylation of GSK3β, correlating with ID severity.
Conclusions:
- Inherited dysregulation of PP2A activity due to mutations in its subunits is a novel cause of intellectual disability.
- Mutations impair PP2A function through dominant-negative mechanisms, affecting substrate dephosphorylation.
- These findings highlight the critical role of precise PP2A regulation in neurodevelopment and provide insights into the molecular basis of ID.
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