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Yeast As a Chassis for Developing Functional Assays to Study Human P53
Published on: August 4, 2019
Stress-mediated Sin3B activation leads to negative regulation of subset of p53 target genes
Rama Kadamb1, Shilpi Mittal2, Nidhi Bansal2
1Dr. B. R. Ambedkar Center for Biomedical Research, University of Delhi, Delhi-110007, India dsalujach59@gmail.com ramakadamb@gmail.com.
Abstract:
The multiprotein SWI-independent 3 (Sin3)-HDAC (histone deacetylase) corepressor complex mediates gene repression through its interaction with DNA-binding factors and recruitment of chromatin-modifying proteins on to the promoters of target gene. Previously, an increased expression of Sin3B and tumour suppressor protein, p53 has been established upon adriamycin treatment. We, now provide evidence that Sin3B expression is significantly up-regulated under variety of stress conditions and this response is not stress-type specific. We observed that Sin3B expression is significantly up-regulated both at transcript and at protein level upon DNA damage induced by bleomycin drug, a radiomimetic agent. This increase in Sin3B expression upon stress is found to be p53-dependent and is associated with enhanced interaction of Sin3B with Ser(15) phosphorylated p53. Binding of Sin3-HDAC repressor complex on to the promoters of p53 target genes influences gene regulation by altering histone modifications (H3K9me3 and H3K27me3) at target genes. Furthermore, knockdown of Sin3B by shRNA severely compromises p53-mediated gene repression under stress conditions. Taken together, these results suggest that stress-induced Sin3B activation is p53-dependent and is essential for p53-mediated repression of its selective target genes. The present study has an implication in understanding the transrepression mechanism of p53 under DNA damaging conditions.
Insights
Stress-induced Sin3B activation is dependent on the tumor suppressor p53. This p53-dependent Sin3B pathway is crucial for repressing target genes under DNA damaging conditions.
Area of Science:
- Molecular Biology
- Epigenetics
- Cancer Research
Background:
- The Sin3-HDAC complex is a key transcriptional repressor.
- Sin3B and p53 expression increase upon adriamycin treatment.
- The role of Sin3B in stress responses is not fully understood.
Purpose of the Study:
- To investigate the regulation of Sin3B expression under various stress conditions.
- To determine the relationship between Sin3B, p53, and gene repression during DNA damage.
- To elucidate the mechanism of p53-mediated transrepression.
Main Methods:
- Quantitative real-time PCR and Western blotting to assess Sin3B expression.
- Bleomycin treatment to induce DNA damage.
- Chromatin immunoprecipitation assays to study protein interactions and histone modifications.
- shRNA-mediated knockdown of Sin3B.
Main Results:
- Sin3B expression is upregulated by various stress conditions, including DNA damage induced by bleomycin.
- This upregulation is p53-dependent and involves interaction with Ser(15) phosphorylated p53.
- Sin3B knockdown impairs p53-mediated repression of target genes under stress.
- The Sin3-HDAC complex alters histone modifications (H3K9me3, H3K27me3) at p53 target gene promoters.
Conclusions:
- Stress-induced Sin3B activation is a p53-dependent process.
- Sin3B is essential for p53-mediated repression of specific target genes during DNA damage.
- This study provides insights into p53 transrepression mechanisms under genotoxic stress.
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