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Updated: Apr 6, 2026

Author Spotlight: Developing Acetyl-Click Assay for HAT1 Inhibitor Screening
Published on: January 26, 2024
Metabolic Regulation of Histone Acetyltransferases by Endogenous Acyl-CoA Cofactors
David C Montgomery1, Alexander W Sorum1, Laura Guasch1
1Chemical Biology Laboratory, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Frederick MD, 21702, USA.
Abstract:
The finding that chromatin modifications are sensitive to changes in cellular cofactor levels potentially links altered tumor cell metabolism and gene expression. However, the specific enzymes and metabolites that connect these two processes remain obscure. Characterizing these metabolic-epigenetic axes is critical to understanding how metabolism supports signaling in cancer, and developing therapeutic strategies to disrupt this process. Here, we describe a chemical approach to define the metabolic regulation of lysine acetyltransferase (KAT) enzymes. Using a novel chemoproteomic probe, we identify a previously unreported interaction between palmitoyl coenzyme A (palmitoyl-CoA) and KAT enzymes. Further analysis reveals that palmitoyl-CoA is a potent inhibitor of KAT activity and that fatty acyl-CoA precursors reduce cellular histone acetylation levels. These studies implicate fatty acyl-CoAs as endogenous regulators of histone acetylation, and suggest novel strategies for the investigation and metabolic modulation of epigenetic signaling.
Insights
Fatty acyl-CoAs, like palmitoyl-CoA, regulate histone acetylation by inhibiting lysine acetyltransferase (KAT) enzymes. This discovery links cellular metabolism to epigenetic modifications in cancer.
Area of Science:
- Biochemistry
- Epigenetics
- Cancer Metabolism
Background:
- Chromatin modifications link cellular metabolism and gene expression.
- Specific metabolic-epigenetic axes in cancer remain poorly understood.
- Understanding these axes is crucial for developing cancer therapeutics.
Purpose of the Study:
- To define the metabolic regulation of lysine acetyltransferase (KAT) enzymes.
- To identify metabolites that modulate KAT activity.
- To explore novel therapeutic strategies targeting metabolic-epigenetic signaling in cancer.
Main Methods:
- Development of a novel chemoproteomic probe.
- Identification of metabolite-enzyme interactions.
- Assessment of fatty acyl-CoA effects on KAT activity and cellular histone acetylation.
Main Results:
- A previously unreported interaction between palmitoyl coenzyme A (palmitoyl-CoA) and KAT enzymes was identified.
- Palmitoyl-CoA was found to be a potent inhibitor of KAT activity.
- Fatty acyl-CoA precursors were shown to reduce cellular histone acetylation levels.
Conclusions:
- Fatty acyl-CoAs act as endogenous regulators of histone acetylation.
- This study implicates fatty acyl-CoAs in epigenetic signaling.
- Novel strategies for investigating and modulating epigenetic signaling through metabolism are suggested.
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