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Bicc1 Polymerization Regulates the Localization and Silencing of Bound mRNA
Benjamin Rothé1, Lucia Leal-Esteban1, Florian Bernet1
1Ecole Polytechnique Fédérale de Lausanne (EPFL), SV ISREC, Lausanne, Switzerland.
Abstract:
Loss of the RNA-binding protein Bicaudal-C (Bicc1) provokes renal and pancreatic cysts as well as ectopic Wnt/β-catenin signaling during visceral left-right patterning. Renal cysts are linked to defective silencing of Bicc1 target mRNAs, including adenylate cyclase 6 (AC6). RNA binding of Bicc1 is mediated by N-terminal KH domains, whereas a C-terminal sterile alpha motif (SAM) self-polymerizes in vitro and localizes Bicc1 in cytoplasmic foci in vivo. To assess a role for multimerization in silencing, we conducted structure modeling and then mutated the SAM domain residues which in this model were predicted to polymerize Bicc1 in a left-handed helix. We show that a SAM-SAM interface concentrates Bicc1 in cytoplasmic clusters to specifically localize and silence bound mRNA. In addition, defective polymerization decreases Bicc1 stability and thus indirectly attenuates inhibition of Dishevelled 2 in the Wnt/β-catenin pathway. Importantly, aberrant C-terminal extension of the SAM domain in bpk mutant Bicc1 phenocopied these defects. We conclude that polymerization is a novel disease-relevant mechanism both to stabilize Bicc1 and to present associated mRNAs in specific silencing platforms.
Insights
The RNA-binding protein Bicaudal-C (Bicc1) requires polymerization via its SAM domain to stabilize and silence target mRNAs, preventing cyst formation and Wnt pathway dysregulation.
Area of Science:
- Molecular Biology
- Developmental Biology
- Genetics
Background:
- Loss of RNA-binding protein Bicaudal-C (Bicc1) causes renal and pancreatic cysts and Wnt/β-catenin signaling defects.
- Renal cysts are associated with impaired silencing of Bicc1 target mRNAs, such as adenylate cyclase 6 (AC6).
- Bicc1's N-terminal KH domains bind RNA, while its C-terminal SAM domain mediates self-polymerization and localization to cytoplasmic foci.
Purpose of the Study:
- To investigate the role of Bicc1 SAM domain polymerization in mRNA silencing and protein stability.
- To determine if SAM domain polymerization is essential for Bicc1's function in regulating Wnt/β-catenin signaling.
- To assess the disease relevance of Bicc1 polymerization defects, particularly in the context of the bpk mutant.
Main Methods:
- Structure modeling of the Bicc1 SAM domain to predict polymerization interfaces.
- Site-directed mutagenesis of SAM domain residues predicted to be involved in polymerization.
- Analysis of Bicc1 localization, mRNA silencing, protein stability, and Wnt/β-catenin pathway activity in wild-type and mutant cells.
- Phenotypic analysis of bpk mutant Bicc1 C-terminal extension.
Main Results:
- SAM domain polymerization concentrates Bicc1 in cytoplasmic clusters, which is crucial for specific mRNA localization and silencing.
- Defective SAM polymerization reduces Bicc1 stability, indirectly decreasing inhibition of Dishevelled 2 in the Wnt/β-catenin pathway.
- Aberrant C-terminal extension of the SAM domain in bpk mutant Bicc1 recapitulates these silencing and stability defects.
Conclusions:
- Bicc1 polymerization via its SAM domain is a novel mechanism for stabilizing the protein and creating platforms for mRNA silencing.
- This polymerization process is critical for preventing renal cysts and maintaining proper Wnt/β-catenin signaling during development.
- SAM domain polymerization represents a disease-relevant mechanism underlying cystogenesis and developmental signaling defects.
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