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Discovery of New Intracellular Pathogens by Amoebal Coculture and Amoebal Enrichment Approaches
Published on: October 27, 2013
Algoriphagus trabzonensis sp. nov., isolated from freshwater, and emended description of Algoriphagus alkaliphilus
Kadriye Inan1, Murat Kacagan2, Aysegul Ozer2
1Faculty of Sciences Department of Molecular Biology and Genetic, Karadeniz Technical University, 61080 Trabzon, Turkey.
Abstract:
A Gram-staining-negative, non-motile, catalase- and oxidase-positive strain, designated MS7(T), was isolated from freshwater of a river near Trabzon, Turkey. Its taxonomy was investigated using a polyphasic approach. The strain grew optimally at 28 °C and pH 7.5 and in the presence of 2.0% NaCl. 16S rRNA gene sequence analysis revealed that the strain belonged to the genus Algoriphagus; strain MS7(T) showed highest sequence similarity to the type strains of Algoriphagus alkaliphilus (97.3%), Algoriphagus terrigena (96.8%), Algoriphagus jejuensis (96.2%), Algoriphagus boritolerans (96.1%) and Algoriphagus aquatilis (95.8%). The major fatty acids of strain MS7(T) were iso-C15 : 0 (30.14%) and summed future 9 (10-methyl C16 : 0 and/or iso-C17 : 1ω9c 18.75%). Polar lipid analysis revealed phosphatidylethanolamine, a variety of unidentified lipids, an unidentified aminophospholipid, an unidentified phospholipid and an unidentified aminolipid. The major isoprenoid quinone was MK-7.The DNA G+C content of MS7(T) was 41.6 mol%, a value consistent with that of members of the genus Algoriphagus. The level of DNA-DNA relatedness between strain MS7(T) and A. alkaliphilus LMG 22694(T) was 41%, which is clearly below the 70% threshold accepted for species delineation. Thus, our results support the placement of strain MS7(T) within a separate and previously unrecognized species. On the basis of these data, the strain is considered to represent a novel species of the genus Algoriphagus, for which the name Algoriphagus trabzonensis sp. nov. is proposed. The type strain is MS7(T) ( = NCCB 100372(T) = LMG 26290(T)). An emended description of A. alkaliphilus is also provided.
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