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Three new HLA-C alleles (HLA-C*14:02:13, HLA-C*15:72 and HLA-C*15:74) in Saudi bone marrow donors
H A Fakhoury1, D Jawdat2, A S Alaskar2
1Department of Basic Sciences, College of Science and Health Professions, King Saud bin Abdulaziz University for Health Sciences, National Guard Health Affairs, Riyadh, Saudi Arabia.
Insights
Sequence-based typing identified three novel Human Leukocyte Antigen (HLA)-C alleles in Saudi bone marrow donors. These discoveries expand the HLA-C allele registry, crucial for matching compatible donors for transplantation.
Area of Science:
- Immunogenetics
- Histocompatibility
- Molecular Biology
Background:
- The Human Leukocyte Antigen (HLA) system plays a critical role in immune response and transplantation compatibility.
- Accurate HLA typing is essential for successful allogeneic bone marrow transplantation.
- The Saudi Bone Marrow Donor Registry (SBMDR) requires continuous updates of HLA allele frequencies.
Purpose of the Study:
- To identify and characterize novel Human Leukocyte Antigen C (HLA-C) alleles within the Saudi population.
- To contribute to the expansion of the global HLA allele database.
- To enhance the accuracy of HLA matching for potential bone marrow donors in the SBMDR.
Main Methods:
- Sequence-Based Typing (SBT) was employed for high-resolution HLA allele identification.
- Analysis focused on donors registered with the Saudi Bone Marrow Donor Registry (SBMDR).
- Novel alleles were characterized by comparing nucleotide sequences to known reference alleles.
Main Results:
- Three new HLA-C alleles were identified: HLA-C*14:02:13, HLA-C*15:72, and HLA-C*15:74.
- HLA-C*14:02:13 differs from HLA-C*14:02:01 by a silent nucleotide substitution.
- HLA-C*15:72 and HLA-C*15:74 result from nonsynonymous nucleotide substitutions leading to amino acid changes.
Conclusions:
- The identification of these novel HLA-C alleles expands the known HLA genetic diversity.
- These findings are significant for improving HLA matching accuracy in bone marrow transplantation.
- The updated allele information benefits the Saudi Bone Marrow Donor Registry and global HLA databases.
Abstract:
Three new HLA-C alleles were identified by sequence-based typing method (SBT) in donors for the Saudi Bone Marrow Donor Registry (SBMDR). HLA-C*14:02:13 differs from HLA-C*14:02:01 by a silent G to A substitution at nucleotide position 400 in exon 2, where lysine at position 66 remains unchanged. HLA-C*15:72 differs from HLA-C*15:22 by a nonsynonymous C to A substitution at nucleotide position 796 in exon 3, resulting in an amino acid change from phenylalanine to leucine at position 116. HLA-C*15:74 differs from HLA-C*15:08 by a nonsynonymous C to T substitution at nucleotide position 914 in exon 3, resulting in an amino acid change from arginine to tryptophan at position 156.
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