Microhydration of Protonated Nα-Acetylhistidine: A Theoretical Approach
Vanessa Riffet1, Guy Bouchoux1, Gilles Frison1
1Laboratoire de Chimie Moléculaire, Ecole Polytechnique and CNRS , 91128 Palaiseau cedex, France.
A combined computational approach explored protonated Nα-acetylhistidine hydration. This method identified more conformers than individual techniques, providing accurate hydration enthalpy predictions validated by experimental data.
Area of Science:
- Computational Chemistry
- Molecular Dynamics
- Biophysics
Background:
- Protonated amino acids play crucial roles in biological systems.
- Understanding hydration effects on amino acid protonation is vital for biochemical studies.
- Nα-acetylhistidine is a model compound for studying histidine protonation.
Purpose of the Study:
- To explore potential energy surfaces of protonated Nα-acetylhistidine with 0-3 water molecules.
- To investigate the combined efficacy of hierarchical and genealogical computational approaches.
- To accurately calculate hydration enthalpies using high-level theoretical methods.
Main Methods:
- Utilized a hybrid hierarchical and genealogical (Darwin family tree) approach.
- Employed the polarizable AMOEBA force field and M06 functional for conformational searching.
- Calculated hydration enthalpies using high-level theoretical methods, including G4MP2 and MP2.
- Validated computational methods against experimental data for model cations.
Main Results:
- The combined computational approach recovered a greater number of conformers than individual methods.
- Calculated hydration enthalpies showed excellent agreement with experimental data for model compounds.
- The first hydration enthalpy of protonated Nα-acetylhistidine was found to be approximately 10 kJ mol⁻¹ lower than that of imidazolium.
Conclusions:
- The hybrid computational strategy is effective for exploring complex potential energy surfaces.
- The study provides accurate hydration enthalpy values for protonated Nα-acetylhistidine.
- The local environment significantly influences the hydration enthalpy of the charged moiety.
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