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A Metadata Extraction Approach for Clinical Case Reports to Enable Advanced Understanding of Biomedical Concepts
Published on: September 20, 2018
First Step to Big Data Research in Hospital
Yongdon Shin1, Changmin Choi1, JaeHo Lee1
1Office of Clinical Research Information, Asan Medical Center, Seoul 138-736, Korea.
Hospitals generate vast data via systems like Electronic Medical Records (EMR). A new clinical research information system, ABLE, addresses challenges in accessing this data for big data research.
Area of Science:
- Biomedical Informatics
- Health Services Research
- Clinical Data Management
Background:
- Hospitals generate substantial data through systems like Electronic Medical Records (EMR), Picture Archiving and Communication Systems (PACS), Computerized Provider Order Entry (CPOE), and Laboratory Information Management Systems (LIMS).
- Despite data accumulation, researchers face significant challenges in accessing and utilizing clinical data for research purposes.
- The increasing volume of healthcare data necessitates improved systems for research accessibility.
Purpose of the Study:
- To introduce a novel clinical research information system designed to overcome data accessibility barriers.
- To demonstrate the utility of the ABLE (Asan BiomedicaL research Environment) system in facilitating clinical big data research.
- To promote the use of integrated clinical data for advancing biomedical research.
Main Methods:
- Development and implementation of the ABLE system, a clinical research information environment.
- Integration of data from various hospital information systems (e.g., EMR, PACS, CPOE, LIMS) into a unified research platform.
- Description of the system architecture and functionalities enabling data retrieval and analysis.
Main Results:
- The ABLE system provides a centralized platform for accessing diverse clinical data.
- It addresses the practical difficulties researchers encounter when trying to use hospital-stored data.
- The system facilitates the transition from data storage to data utilization for research.
Conclusions:
- Clinical research information systems are essential for leveraging hospital big data.
- The ABLE system serves as a practical example of such a necessary infrastructure.
- Implementing systems like ABLE can significantly promote and enable large-scale clinical data research.
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