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Updated: Apr 5, 2026

An In vitro Model to Study Immune Responses of Human Peripheral Blood Mononuclear Cells to Human Respiratory Syncytial Virus Infection
Published on: December 10, 2013
Associations Between Viral and Bacterial Potential Pathogens in the Nasopharynx of Children With and Without
Chrysanthi L Skevaki1, Paraskevi Tsialta, Aikaterini I Trochoutsou
1From the *Second Department of Pediatrics, University of Athens, School of Medicine, and †Microbiology Laboratory, "P & A Kyriakou" Children's Hospital, Athens, Greece.
Insights
Viral respiratory infections alter nasopharyngeal (NP) bacterial colonization in children. Symptomatic children showed higher rates of Streptococcus pneumoniae (SP), Moraxella catarrhalis (MC), and mixed bacterial colonization, particularly with certain viruses.
Area of Science:
- Pediatric infectious diseases
- Microbiology
- Epidemiology
Background:
- Nasopharyngeal (NP) bacterial colonization is a prerequisite for respiratory and invasive infections.
- Understanding colonization patterns in children with and without viral respiratory infections is crucial.
Purpose of the Study:
- To compare NP bacterial colonization rates in children with and without acute viral respiratory tract infections.
- To investigate associations between identified microorganisms in the nasopharynx.
Main Methods:
- Recruitment of children aged 3 months to 6 years, with and without acute viral respiratory tract infections.
- NP sample analysis for Streptococcus pneumoniae (SP), Haemophilus influenzae (HI), Moraxella catarrhalis (MC), Staphylococcus aureus, and Streptococcus pyogenes via culture.
- Detection of viruses using polymerase chain reaction (PCR).
Main Results:
- Symptomatic children exhibited higher rates of SP, MC, and mixed bacterial colonization compared to asymptomatic children.
- Moraxella catarrhalis colonization was more frequent in symptomatic, virus-positive children.
- Specific viral associations were observed: Influenza virus with HI and MC; Respiratory Syncytial Virus with HI; Rhinovirus with MC. Negative association between SP and S. aureus was noted.
Conclusions:
- Viral infections significantly influence NP bacterial colonization patterns in children.
- Interactions between bacteria and viruses in the nasopharynx may impact disease development.
- Continuous surveillance is recommended to monitor the effects of interventions like vaccines on these colonization dynamics.
Background:
Nasopharyngeal (NP) bacterial colonization is necessary for subsequent respiratory and/or invasive infection. Our study aimed at comparing NP bacterial colonization rates between children with and without symptoms of an acute viral respiratory tract infection and examining associations between identified microorganisms.
Methods:
Children 3 months to 6 years of age with and without an acute viral respiratory tract infection were recruited, and a questionnaire was filled. NP samples were examined for Streptococcus pneumoniae (SP), Haemophilus influenzae (HI), Moraxella catarrhalis (MC), Staphylococcus aureus and Streptococcus pyogenes by culture. Viruses were detected with polymerase chain reaction.
Results:
Median age of the 386 recruited children was 23.4 months, and 127 had no respiratory symptoms. More asymptomatic subjects were found negative for all bacteria tested (P < 0.01). SP (P < 0.01), MC (P = 0.001) and mixed bacterial colonization patterns were more frequent among symptomatic children (P < 0.05). Colonization of symptomatic, virus-positive children with MC was higher than in asymptomatic and/or virus-negative children (P = 0.005). The highest HI and MC colonization rates were recorded in association with influenza virus. A strongly negative association between SP and S. aureus, a higher rate of HI detection among SP colonized children and an increased likelihood of MC detection in the presence of HI were observed. HI colonization was more likely in the presence of respiratory syncytial virus and MC colonization was associated with rhinovirus detection.
Conclusions:
Viruses are associated with different NP bacterial colonization patterns. Observed pathogens' associations may play a role in disease, and continuous surveillance is required to follow possible effects of interventions such as vaccines.
Related Concept Videos
Microbiota of the Respiratory Tract
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Acute Pharyngitis
Acute pharyngitis is the inflammation of the back of the throat (pharynx), commonly resulting in a sore throat. It is a frequently encountered condition that prompts individuals to seek medical advice.
Classification
Acute pharyngitis can be categorized based on its underlying cause:
Viral Recombination
Development of the Oral Microbiota

