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Updated: Apr 5, 2026

Immunopeptidomics: Isolation of Mouse and Human MHC Class I- and II-Associated Peptides for Mass Spectrometry Analysis
Published on: October 15, 2021
Extended O-GlcNAc on HLA Class-I-Bound Peptides
Fabio Marino1,2, Marshall Bern3, Geert P M Mommen1,2,4
1Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands.
Researchers discovered unexpected glycosylation on human leukocyte antigen (HLA) class I peptides. These extended O-linked N-acetylglucosamine (O-GlcNAc) modifications on HLA peptides may be crucial targets for immune surveillance.
Area of Science:
- Immunology
- Glycobiology
- Mass Spectrometry
Background:
- Human leukocyte antigen (HLA) class I molecules present peptides to T cells, crucial for immune surveillance.
- Glycosylation, the addition of sugars, typically occurs on proteins in the endoplasmic reticulum and Golgi apparatus.
- O-linked glycosylation is a common post-translational modification, but its role on HLA-bound peptides is not well understood.
Purpose of the Study:
- To investigate unexpected mass spectrometric observations of glycosylated HLA class I-bound peptides.
- To characterize the nature and origin of these glycosylations.
- To explore the potential immunogenicity of these modified peptides.
Main Methods:
- Mass spectrometry for peptide and glycan analysis.
- Molecular modeling to understand structural implications.
- In vitro enzymatic assays to confirm glycosyltransferase activity.
- Oxonium ion pattern analysis for glycan structure elucidation.
Main Results:
- Identification of O-linked glycans on HLA class I peptides, extending beyond typical terminal modifications.
- Proposal that these glycans are extended O-N-acetylglucosamine (O-GlcNAc) structures, not GalNAc-initiated.
- First report of natural HLA class I presentation of O- and N-linked glycopeptides derived from membrane proteins.
- Observed that centrally located oligosaccharides on HLA class I peptides can be immunogenic.
Conclusions:
- HLA class I peptides can undergo complex O-GlcNAc glycosylation due to their trafficking through glycosylation-competent cellular compartments.
- These glycosylated HLA peptides, particularly those with central oligosaccharides, represent potential targets for immune surveillance.
- This finding expands the understanding of post-translational modifications on HLA molecules and their implications for immunity.
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